RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
TRIM6-208ENST00000506134 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-208ENST00000506134 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
TRIM6-208ENST00000506134 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
TRIM6-208ENST00000506134 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
TRIM6-208ENST00000506134 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
TRIM6-208ENST00000506134 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-208ENST00000506134 H0YIN7 160 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 SRGNP10124 158 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
TRIM6-208ENST00000506134 KCNA3P22001 575 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 TGFB2P61812 414 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
TRIM6-208ENST00000506134 NLGN2Q8NFZ4 835 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
TRIM6-208ENST00000506134 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
TRIM6-208ENST00000506134 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
TRIM6-208ENST00000506134 CSF1RP07333 972 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 CTSWP56202 376 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIM6-208ENST00000506134 BICC1Q9H694 974 aaKnown RBP12.34□□□□□ -0.43
TRIM6-208ENST00000506134 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
TRIM6-208ENST00000506134 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
TRIM6-208ENST00000506134 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.43
TRIM6-208ENST00000506134 GNAI2P04899 355 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 GREM2Q9H772 168 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 WWC3Q9ULE0 1092 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
TRIM6-208ENST00000506134 NPR1P16066 1061 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
TRIM6-208ENST00000506134 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
TRIM6-208ENST00000506134 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 EXOC6Q8TAG9 804 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 RPGRQ92834 1020 aaKnown RBP12.32□□□□□ -0.44
TRIM6-208ENST00000506134 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 CHMP3Q9Y3E7 222 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 LAMB2P55268 1798 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 LRP5O75197 1615 aa12.32□□□□□ -0.44
TRIM6-208ENST00000506134 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
TRIM6-208ENST00000506134 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
TRIM6-208ENST00000506134 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
TRIM6-208ENST00000506134 ITGA6P23229 1130 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
TRIM6-208ENST00000506134 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
TRIM6-208ENST00000506134 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 TAF1P21675 1872 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 MYH3P11055 1940 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
TRIM6-208ENST00000506134 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
TRIM6-208ENST00000506134 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
TRIM6-208ENST00000506134 COL11A2P13942 1736 aaPredicted RBP12.29□□□□□ -0.44
TRIM6-208ENST00000506134 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
TRIM6-208ENST00000506134 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
TRIM6-208ENST00000506134 GRAPQ13588 217 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 SLC51AQ86UW1 340 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
TRIM6-208ENST00000506134 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
TRIM6-208ENST00000506134 COL4A1P02462 1669 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 BBOX1O75936 387 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 MTX1Q13505 466 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 DALRD3Q5D0E6 543 aaKnown RBP12.28□□□□□ -0.44
TRIM6-208ENST00000506134 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
TRIM6-208ENST00000506134 CEP85Q6P2H3 762 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 PCDHB15Q9Y5E8 787 aa12.28□□□□□ -0.44
TRIM6-208ENST00000506134 SLX4Q8IY92 1834 aa12.27□□□□□ -0.45
TRIM6-208ENST00000506134 OLFM4Q6UX06 510 aa12.27□□□□□ -0.45
TRIM6-208ENST00000506134 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
TRIM6-208ENST00000506134 RPAP2Q8IXW5 612 aaPredicted RBP12.27□□□□□ -0.45
TRIM6-208ENST00000506134 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.45
TRIM6-208ENST00000506134 CDC5LQ99459 802 aaKnown RBP12.27□□□□□ -0.45
TRIM6-208ENST00000506134 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
TRIM6-208ENST00000506134 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
TRIM6-208ENST00000506134 C21orf2O43822 256 aa12.26□□□□□ -0.45
TRIM6-208ENST00000506134 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
TRIM6-208ENST00000506134 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
TRIM6-208ENST00000506134 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
TRIM6-208ENST00000506134 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
TRIM6-208ENST00000506134 PA2G4Q9UQ80 394 aaKnown RBP12.26□□□□□ -0.45
TRIM6-208ENST00000506134 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms