RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ETFBKMTQ8IXQ9 262 aa9.83□□□□□ -0.84
DEPDC1B-203ENST00000505017 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1B-203ENST00000505017 RTCBQ9Y3I0 505 aaKnown RBP9.83□□□□□ -0.84
DEPDC1B-203ENST00000505017 ATG7O95352 703 aa9.82□□□□□ -0.84
DEPDC1B-203ENST00000505017 TREML1Q86YW5 311 aa9.82□□□□□ -0.84
DEPDC1B-203ENST00000505017 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
DEPDC1B-203ENST00000505017 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
DEPDC1B-203ENST00000505017 A0A0A0MRY4 1105 aa9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 DHX32Q7L7V1 743 aaKnown RBP9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 TRPM4Q8TD43 1214 aa9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 LPIN3Q9BQK8 851 aa9.81□□□□□ -0.84
DEPDC1B-203ENST00000505017 SELPP16109 830 aa9.8□□□□□ -0.84
DEPDC1B-203ENST00000505017 GATA4P43694 442 aa9.8□□□□□ -0.84
DEPDC1B-203ENST00000505017 MLLT1Q03111 559 aaPredicted RBP9.8□□□□□ -0.84
DEPDC1B-203ENST00000505017 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
DEPDC1B-203ENST00000505017 PERM1Q5SV97 790 aa9.8□□□□□ -0.84
DEPDC1B-203ENST00000505017 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 EGFRP00533 1210 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 CPB1P15086 417 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 EPB42P16452 691 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 FAM35AQ86V20 835 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 RGL4Q8IZJ4 473 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 C11orf16Q9NQ32 467 aa9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 CXXC1Q9P0U4 656 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1B-203ENST00000505017 ARID3CA6NKF2 412 aa9.78□□□□□ -0.84
DEPDC1B-203ENST00000505017 TRIP4Q15650 581 aaPredicted RBP9.78□□□□□ -0.84
DEPDC1B-203ENST00000505017 MKNK1Q9BUB5 465 aa9.78□□□□□ -0.84
DEPDC1B-203ENST00000505017 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
DEPDC1B-203ENST00000505017 RARAP10276 462 aa9.77□□□□□ -0.85
DEPDC1B-203ENST00000505017 RSPO4Q2I0M5 234 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-203ENST00000505017 SHISA2Q6UWI4 295 aa9.77□□□□□ -0.85
DEPDC1B-203ENST00000505017 DMRTC2Q8IXT2 367 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-203ENST00000505017 XYLBO75191 536 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 RGS9O75916 674 aaPredicted RBP9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 GPLD1P80108 840 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 NAA30Q147X3 362 aaPredicted RBP9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 NKAPLQ5M9Q1 402 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 HFE2Q6ZVN8 426 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 COL26A1Q96A83 441 aa9.76□□□□□ -0.85
DEPDC1B-203ENST00000505017 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-203ENST00000505017 CLP1Q92989 425 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-203ENST00000505017 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-203ENST00000505017 ZBTB39O15060 712 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 MMP20O60882 483 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 APBA3O96018 575 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 ELNP15502 786 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 FMR1NBQ8N0W7 255 aaPredicted RBP9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 FRRS1LQ9P0K9 344 aa9.74□□□□□ -0.85
DEPDC1B-203ENST00000505017 NRLP54845 237 aa9.73□□□□□ -0.85
DEPDC1B-203ENST00000505017 ADGRE1Q14246 886 aa9.73□□□□□ -0.85
DEPDC1B-203ENST00000505017 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
DEPDC1B-203ENST00000505017 XP32Q5T750 250 aa9.73□□□□□ -0.85
DEPDC1B-203ENST00000505017 SEMA6BQ9H3T3 888 aa9.73□□□□□ -0.85
DEPDC1B-203ENST00000505017 SCNN1AP37088 669 aa9.72□□□□□ -0.85
DEPDC1B-203ENST00000505017 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
DEPDC1B-203ENST00000505017 J3QW42 95 aa9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 TTC9Q92623 222 aa9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 LENG1Q96BZ8 264 aaPredicted RBP9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
DEPDC1B-203ENST00000505017 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 HOXD8P13378 290 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 PCSK7Q16549 785 aa9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 FOXD4L6Q3SYB3 417 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 FOXD4L3Q6VB84 417 aaPredicted RBP9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
DEPDC1B-203ENST00000505017 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1B-203ENST00000505017 NACC1Q96RE7 527 aa9.69□□□□□ -0.86
DEPDC1B-203ENST00000505017 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 SIK1P57059 783 aa9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 RAC1P63000 192 aa9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 GTF3C3Q9Y5Q9 886 aa9.68□□□□□ -0.86
DEPDC1B-203ENST00000505017 C9orf172C9J069 976 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 DYRK3O43781 588 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 EIF2AK2P19525 551 aaKnown RBP9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 ZAP70P43403 619 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 Q8N3U1 123 aa9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
DEPDC1B-203ENST00000505017 ATP2B4P23634 1241 aa9.66□□□□□ -0.86
DEPDC1B-203ENST00000505017 SOX18P35713 384 aa9.66□□□□□ -0.86
DEPDC1B-203ENST00000505017 NLRP13Q86W25 1043 aa9.66□□□□□ -0.86
DEPDC1B-203ENST00000505017 PLD4Q96BZ4 506 aa9.66□□□□□ -0.86
DEPDC1B-203ENST00000505017 STIM2Q9P246 746 aa9.66□□□□□ -0.86
DEPDC1B-203ENST00000505017 PTCD1O75127 700 aaKnown RBP9.65□□□□□ -0.86
DEPDC1B-203ENST00000505017 TXNRD3Q86VQ6 643 aa9.65□□□□□ -0.86
DEPDC1B-203ENST00000505017 WFDC8Q8IUA0 241 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms