RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
SSBP2-204ENST00000504985 PIK3C2BO00750 1634 aa8.92□□□□□ -0.98
SSBP2-204ENST00000504985 NEURL4Q96JN8 1562 aa8.92□□□□□ -0.98
SSBP2-204ENST00000504985 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
SSBP2-204ENST00000504985 PREX1Q8TCU6 1659 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 WASHC2AQ641Q2 1341 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 VAC14Q08AM6 782 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 MAP7D1Q3KQU3 841 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 GPAT2Q6NUI2 795 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 TMEM214Q6NUQ4 689 aaKnown RBP8.91□□□□□ -0.98
SSBP2-204ENST00000504985 GGT6Q6P531 493 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 DNAAF2Q9NVR5 837 aaKnown RBP8.91□□□□□ -0.98
SSBP2-204ENST00000504985 ARHGAP31Q2M1Z3 1444 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 UHRF1BP1Q6BDS2 1440 aa8.91□□□□□ -0.98
SSBP2-204ENST00000504985 IFT172Q9UG01 1749 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 C2CD2LO14523 706 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 INHAP05111 366 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 HSP90AA1P07900 732 aaKnown RBP8.9□□□□□ -0.98
SSBP2-204ENST00000504985 NEDD1Q8NHV4 660 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 PHF24Q9UPV7 400 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 ADGRB3O60242 1522 aa8.9□□□□□ -0.98
SSBP2-204ENST00000504985 NOS1P29475 1434 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 CNTLNQ9NXG0 1405 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 SHISA8B8ZZ34 492 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 HOXB4P17483 251 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-204ENST00000504985 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 NBPF8Q3BBV2 869 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-204ENST00000504985 TRPM1Q7Z4N2 1603 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 RALGAPBQ86X10 1494 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 KIF1BO60333 1816 aa8.89□□□□□ -0.99
SSBP2-204ENST00000504985 MADDQ8WXG6 1647 aa8.88□□□□□ -0.99
SSBP2-204ENST00000504985 PPM1GO15355 546 aaPredicted RBP8.88□□□□□ -0.99
SSBP2-204ENST00000504985 BNIP3LO60238 219 aa8.88□□□□□ -0.99
SSBP2-204ENST00000504985 BCCIPQ9P287 314 aaKnown RBP eCLIP8.88□□□□□ -0.99
SSBP2-204ENST00000504985 GDF2Q9UK05 429 aaPredicted RBP8.88□□□□□ -0.99
SSBP2-204ENST00000504985 TMEM229AB2RXF0 380 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 SOX11P35716 441 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 GDF10P55107 478 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
SSBP2-204ENST00000504985 MTFR1Q15390 333 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 TLR1Q15399 786 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 OXLD1Q5BKU9 147 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 NPM2Q86SE8 214 aaKnown RBP8.87□□□□□ -0.99
SSBP2-204ENST00000504985 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 HCN2Q9UL51 889 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
SSBP2-204ENST00000504985 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 PTPRMP28827 1452 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 ERVK-7P63135 1459 aa8.87□□□□□ -0.99
SSBP2-204ENST00000504985 ATP4AP20648 1035 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
SSBP2-204ENST00000504985 ANP32AP39687 249 aaKnown RBP8.86□□□□□ -0.99
SSBP2-204ENST00000504985 SMTNP53814 917 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 CALD1Q05682 793 aaKnown RBP8.86□□□□□ -0.99
SSBP2-204ENST00000504985 MCM6Q14566 821 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 EFHC2Q5JST6 749 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
SSBP2-204ENST00000504985 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 CTBSQ01459 385 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 PGBD3Q8N328 593 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 GALNT6Q8NCL4 622 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 IPO4Q8TEX9 1081 aaKnown RBP8.86□□□□□ -0.99
SSBP2-204ENST00000504985 EDARADDQ8WWZ3 215 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 PCDHGA11Q9Y5H2 935 aa8.86□□□□□ -0.99
SSBP2-204ENST00000504985 LAMC1P11047 1609 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 PPLO60437 1756 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
SSBP2-204ENST00000504985 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 MYOM2P54296 1465 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 PROCP04070 461 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 NLRP8Q86W28 1048 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 ABHD17AQ96GS6 310 aa8.85□□□□□ -0.99
SSBP2-204ENST00000504985 NAP1L2Q9ULW6 460 aaPredicted RBP8.85□□□□□ -0.99
SSBP2-204ENST00000504985 TMEM131LA2VDJ0 1609 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 NEFMP07197 916 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 HSP90B1P14625 803 aaKnown RBP8.84□□□□□ -0.99
SSBP2-204ENST00000504985 FGFR3P22607 806 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 ABL2P42684 1182 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 CNGB1Q14028 1251 aaPredicted RBP8.84□□□□□ -0.99
SSBP2-204ENST00000504985 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 DCAF11Q8TEB1 546 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 IPO9Q96P70 1041 aaKnown RBP8.84□□□□□ -0.99
SSBP2-204ENST00000504985 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
SSBP2-204ENST00000504985 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
SSBP2-204ENST00000504985 FER1L4A9Z1Z3 1794 aa8.83□□□□□ -1
SSBP2-204ENST00000504985 MYO5BQ9ULV0 1848 aa8.83□□□□□ -1
SSBP2-204ENST00000504985 CDK2AP1O14519 115 aa8.83□□□□□ -1
SSBP2-204ENST00000504985 RGL3Q3MIN7 710 aa8.83□□□□□ -1
SSBP2-204ENST00000504985 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
SSBP2-204ENST00000504985 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms