RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 ZNF280CQ8ND82 737 aa7.82□□□□□ -1.16
PROM1-205ENST00000504842 SNX29Q8TEQ0 813 aa7.82□□□□□ -1.16
PROM1-205ENST00000504842 C7orf43Q8WVR3 580 aa7.82□□□□□ -1.16
PROM1-205ENST00000504842 HSH2DQ96JZ2 352 aa7.82□□□□□ -1.16
PROM1-205ENST00000504842 DMGDHQ9UI17 866 aaKnown RBP7.82□□□□□ -1.16
PROM1-205ENST00000504842 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 TNFRSF21O75509 655 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 CTSOP43234 321 aaPredicted RBP7.81□□□□□ -1.16
PROM1-205ENST00000504842 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
PROM1-205ENST00000504842 LYSMD3Q7Z3D4 306 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 BTLAQ7Z6A9 289 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
PROM1-205ENST00000504842 GJA3Q9Y6H8 435 aa7.81□□□□□ -1.16
PROM1-205ENST00000504842 PHACTR2O75167 634 aa7.8□□□□□ -1.16
PROM1-205ENST00000504842 INPP5BP32019 993 aa7.8□□□□□ -1.16
PROM1-205ENST00000504842 CCDC74AQ96AQ1 378 aa7.8□□□□□ -1.16
PROM1-205ENST00000504842 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
PROM1-205ENST00000504842 FOXD3Q9UJU5 478 aaPredicted RBP7.8□□□□□ -1.16
PROM1-205ENST00000504842 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 FIGNL2A6NMB9 653 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
PROM1-205ENST00000504842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
PROM1-205ENST00000504842 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 ZIC5Q96T25 663 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 TANGO6Q9C0B7 1094 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 C12orf49Q9H741 205 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 ZFYVE28Q9HCC9 887 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.79□□□□□ -1.16
PROM1-205ENST00000504842 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
PROM1-205ENST00000504842 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
PROM1-205ENST00000504842 DCAF1Q9Y4B6 1507 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 CTSHP09668 335 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 ATP4AP20648 1035 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 HS2ST1Q7LGA3 356 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 SLC43A3Q8NBI5 491 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 SRCIN1Q9C0H9 1055 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 FAM8A1Q9UBU6 413 aa7.78□□□□□ -1.16
PROM1-205ENST00000504842 MSX1P28360 303 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 USPL1Q5W0Q7 1092 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 ZNF654Q8IZM8 581 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 EPS8L3Q8TE67 593 aaKnown RBP7.77□□□□□ -1.17
PROM1-205ENST00000504842 PMEPA1Q969W9 287 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 CEP63Q96MT8 703 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 TINF2Q9BSI4 451 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 KCNMB2Q9Y691 235 aa7.77□□□□□ -1.17
PROM1-205ENST00000504842 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
PROM1-205ENST00000504842 XYLBO75191 536 aa7.76□□□□□ -1.17
PROM1-205ENST00000504842 TAF1CQ15572 869 aaPredicted RBP7.76□□□□□ -1.17
PROM1-205ENST00000504842 TRIP4Q15650 581 aaPredicted RBP7.76□□□□□ -1.17
PROM1-205ENST00000504842 ACBD3Q9H3P7 528 aa7.76□□□□□ -1.17
PROM1-205ENST00000504842 PPP4R2Q9NY27 417 aa7.76□□□□□ -1.17
PROM1-205ENST00000504842 PRKAG2Q9UGJ0 569 aa7.76□□□□□ -1.17
PROM1-205ENST00000504842 USP31Q70CQ4 1352 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 GADD45BO75293 160 aaPredicted RBP7.75□□□□□ -1.17
PROM1-205ENST00000504842 ATP2B1P20020 1258 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 PI16Q6UXB8 463 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 KLRG1Q96E93 195 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 CNTNAP3BQ96NU0 1288 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 CNTNAP3Q9BZ76 1288 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 OSBPL7Q9BZF2 842 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 C11orf16Q9NQ32 467 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 TMEM63CQ9P1W3 806 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 INPP5FQ9Y2H2 1132 aa7.75□□□□□ -1.17
PROM1-205ENST00000504842 HMGB1P09429 215 aaKnown RBP7.74□□□□□ -1.17
PROM1-205ENST00000504842 RHOQP17081 205 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 IRS1P35568 1242 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 PTSQ03393 145 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
PROM1-205ENST00000504842 TYRO3Q06418 890 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 TTC39BQ5VTQ0 682 aaPredicted RBP7.74□□□□□ -1.17
PROM1-205ENST00000504842 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 NPHS2Q9NP85 383 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 ABI2Q9NYB9 513 aaPredicted RBP7.74□□□□□ -1.17
PROM1-205ENST00000504842 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
PROM1-205ENST00000504842 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
PROM1-205ENST00000504842 CDC14CA4D256 554 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 EGFRP00533 1210 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 USP17L7P0C7H9 530 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 ST13P50502 369 aaKnown RBP7.73□□□□□ -1.17
PROM1-205ENST00000504842 GALNT12Q8IXK2 581 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 BCO2Q9BYV7 579 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
PROM1-205ENST00000504842 POLR3DP05423 398 aaPredicted RBP7.72□□□□□ -1.17
PROM1-205ENST00000504842 CES1P23141 567 aa7.72□□□□□ -1.17
PROM1-205ENST00000504842 DNAJA1P31689 397 aaKnown RBP7.72□□□□□ -1.17
PROM1-205ENST00000504842 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
PROM1-205ENST00000504842 NXPE4Q6UWF7 544 aa7.72□□□□□ -1.17
PROM1-205ENST00000504842 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
PROM1-205ENST00000504842 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms