RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CSF1RP07333 972 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 POTEIP0CG38 1075 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 CCT4P50991 539 aaKnown RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 RABL6Q3YEC7 729 aaPredicted RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 BICDL1Q6ZP65 573 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SLC51AQ86UW1 340 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 CCDC24Q8N4L8 307 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 ZBTB40Q9NUA8 1239 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 CWC25Q9NXE8 425 aaPredicted RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 FER1L6Q2WGJ9 1857 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 RTL9Q8NET4 1388 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 MVPQ14764 893 aaKnown RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
LMNB1-208ENST00000504788 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 ANKRD44Q8N8A2 993 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 BRIP1Q9BX63 1249 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SPON1Q9HCB6 807 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 DUOX1Q9NRD9 1551 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SH3TC1Q8TE82 1336 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 SRGNP10124 158 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 HOXA10P31260 410 aaPredicted RBP6.26□□□□□ -1.41
LMNB1-208ENST00000504788 RFX5P48382 616 aaPredicted RBP6.26□□□□□ -1.41
LMNB1-208ENST00000504788 MTX1Q13505 466 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 CNBD1Q8NA66 436 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 SUCLG2Q96I99 432 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 ARXQ96QS3 562 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 UTP14AQ9BVJ6 771 aaKnown RBP6.26□□□□□ -1.41
LMNB1-208ENST00000504788 COG6Q9Y2V7 657 aa6.26□□□□□ -1.41
LMNB1-208ENST00000504788 ZNF646O15015 1829 aaPredicted RBP6.26□□□□□ -1.41
LMNB1-208ENST00000504788 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 NEXNQ0ZGT2 675 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 PPP1R42Q7Z4L9 355 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 NBPF5PQ86XG9 351 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 NLGN2Q8NFZ4 835 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 SYT17Q9BSW7 474 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 TRMT112Q9UI30 125 aaKnown RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 PARP3Q9Y6F1 533 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 SBF1O95248 1867 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 FAM177BA6PVY3 158 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 RTL5Q5HYW3 569 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 NPM2Q86SE8 214 aaKnown RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 C7orf43Q8WVR3 580 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 FHDC1Q9C0D6 1143 aaPredicted RBP6.25□□□□□ -1.41
LMNB1-208ENST00000504788 NYXQ9GZU5 481 aa6.25□□□□□ -1.41
LMNB1-208ENST00000504788 PNMA6EA0A0J9YXQ4 647 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 POTEMA6NI47 508 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 PDE8AO60658 829 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 CD44P16070 742 aaKnown RBP6.24□□□□□ -1.41
LMNB1-208ENST00000504788 CHRNA5P30532 468 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 CTSWP56202 376 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 TGFB2P61812 414 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 CRBNQ96SW2 442 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 BICC1Q9H694 974 aaKnown RBP6.24□□□□□ -1.41
LMNB1-208ENST00000504788 GREM2Q9H772 168 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 DDX19BQ9UMR2 479 aa6.24□□□□□ -1.41
LMNB1-208ENST00000504788 LRRFIP2Q9Y608 721 aaKnown RBP6.24□□□□□ -1.41
LMNB1-208ENST00000504788 PRR29P0C7W0 189 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 DPEP1P16444 411 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 PTPN12Q05209 780 aaKnown RBP6.23□□□□□ -1.41
LMNB1-208ENST00000504788 CELF1Q92879 486 aaKnown RBP6.23□□□□□ -1.41
LMNB1-208ENST00000504788 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 PCDHB15Q9Y5E8 787 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
LMNB1-208ENST00000504788 CCDC88AQ3V6T2 1871 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 ARAP2Q8WZ64 1704 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 COL4A5P29400 1685 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 IRS2Q9Y4H2 1338 aa6.23□□□□□ -1.41
LMNB1-208ENST00000504788 A0A0G2JLW4 131 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 GNAI3P08754 354 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 MS4A1P11836 297 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 POLD1P28340 1107 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 FAM161AQ3B820 660 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 CHADLQ6NUI6 762 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 CEP85Q6P2H3 762 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 ITPRIPQ8IWB1 547 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 FTSJ3Q8IY81 847 aaKnown RBP6.22□□□□□ -1.41
LMNB1-208ENST00000504788 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.22□□□□□ -1.41
LMNB1-208ENST00000504788 EXOC6Q8TAG9 804 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 SSH3Q8TE77 659 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 CRAMP1Q96RY5 1269 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 C9orf78Q9NZ63 289 aaPredicted RBP6.22□□□□□ -1.41
LMNB1-208ENST00000504788 CHD4Q14839 1912 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 DICER1Q9UPY3 1922 aaKnown RBP6.22□□□□□ -1.41
LMNB1-208ENST00000504788 UBTFL1P0CB47 393 aaPredicted RBP6.22□□□□□ -1.41
LMNB1-208ENST00000504788 PRELPP51888 382 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 ST5P78524 1137 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 VGLL2Q8N8G2 317 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 NLRP3Q96P20 1036 aa6.22□□□□□ -1.41
LMNB1-208ENST00000504788 PSME4Q14997 1843 aa6.21□□□□□ -1.41
LMNB1-208ENST00000504788 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms