RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 JRKLQ9Y4A0 524 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 FANCGO15287 622 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 AOPEPQ8N6M6 819 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 ELP1O95163 1332 aa16.58■□□□□ 0.25
COL6A4P2-202ENST00000504443 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.25
COL6A4P2-202ENST00000504443 APPP05067 770 aa16.58■□□□□ 0.25
COL6A4P2-202ENST00000504443 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.25
COL6A4P2-202ENST00000504443 PTPRMP28827 1452 aa16.58■□□□□ 0.24
COL6A4P2-202ENST00000504443 ARMCX5Q6P1M9 558 aa16.58■□□□□ 0.24
COL6A4P2-202ENST00000504443 UBXN6Q9BZV1 441 aa16.58■□□□□ 0.24
COL6A4P2-202ENST00000504443 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
COL6A4P2-202ENST00000504443 H3BQF6 201 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 FOSBP53539 338 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 EVCP57679 992 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 TMC6Q7Z403 805 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 GOLGA5Q8TBA6 731 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 TTC21BQ7Z4L5 1316 aa16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
COL6A4P2-202ENST00000504443 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 SMC2O95347 1197 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 AK7Q96M32 723 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
COL6A4P2-202ENST00000504443 TADA3O75528 432 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 PLEKHA4Q9H4M7 779 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 MYCBPQ99417 103 aaPredicted RBP16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 GOLGA8FQ08AF8 430 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 GOLGA8DPQ0D2H9 430 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 NCAPGQ9BPX3 1015 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
COL6A4P2-202ENST00000504443 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 ACTN2P35609 894 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 MMP14P50281 582 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 ETF1P62495 437 aaKnown RBP16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 GOLGA6L1Q8N7Z2 621 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 FOXO3O43524 673 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 STX1AQ16623 288 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 XPO4Q9C0E2 1151 aaKnown RBP16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 IFNKQ9P0W0 207 aa16.54■□□□□ 0.24
COL6A4P2-202ENST00000504443 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 VPS18Q9P253 973 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 JAK2O60674 1132 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 RAB11FIP3O75154 756 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 ZSWIM4Q9H7M6 989 aa16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 SOS1Q07889 1333 aaPredicted RBP16.53■□□□□ 0.24
COL6A4P2-202ENST00000504443 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
COL6A4P2-202ENST00000504443 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
COL6A4P2-202ENST00000504443 ADCY9O60503 1353 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 AOX1Q06278 1338 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 PPFIA3O75145 1194 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 GSDMDP57764 484 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 CT47A1Q5JQC4 288 aaPredicted RBP16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 WAPLQ7Z5K2 1190 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 CNTROBQ8N137 903 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 FUT8Q9BYC5 575 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 PARD6BQ9BYG5 372 aa16.52■□□□□ 0.23
COL6A4P2-202ENST00000504443 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 EIF3CQ99613 913 aaKnown RBP16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 ARFGAP3Q9NP61 516 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 N4BP1O75113 896 aaKnown RBP16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 FLIIQ13045 1269 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 MCM6Q14566 821 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 LEKR1Q6ZMV7 388 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 USP44Q9H0E7 712 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 KCND1Q9NSA2 647 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
COL6A4P2-202ENST00000504443 ATP7BP35670 1465 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms