RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
SNX25-202ENST00000504273 C9orf78Q9NZ63 289 aaPredicted RBP8.56□□□□□ -1.04
SNX25-202ENST00000504273 RFX5P48382 616 aaPredicted RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 NEK4P51957 841 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 CASP7P55210 303 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 GCKRQ14397 625 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 EAF2Q96CJ1 260 aaPredicted RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 METTL22Q9BUU2 404 aaPredicted RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 ANO2Q9NQ90 1003 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 NBPF26B4DH59 902 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 ANAPC15P60006 121 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 JARID2Q92833 1246 aaPredicted RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 TTC41PQ6P2S7 1318 aa8.55□□□□□ -1.04
SNX25-202ENST00000504273 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
SNX25-202ENST00000504273 ST18O60284 1047 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 PTH1RQ03431 593 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 SNX14Q9Y5W7 946 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 RAD50Q92878 1312 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 HSP90AA1P07900 732 aaKnown RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 TTC14Q96N46 770 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 MYD88Q99836 296 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 LMBRD1Q9NUN5 540 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 TCHHQ07283 1943 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 WDR17Q8IZU2 1322 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
SNX25-202ENST00000504273 ITGB4P16144 1822 aa8.54□□□□□ -1.04
SNX25-202ENST00000504273 COL15A1P39059 1388 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 KCNB2Q92953 911 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 CWC22Q9HCG8 908 aaKnown RBP8.53□□□□□ -1.04
SNX25-202ENST00000504273 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 DDB1Q16531 1140 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
SNX25-202ENST00000504273 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
SNX25-202ENST00000504273 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
SNX25-202ENST00000504273 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.04
SNX25-202ENST00000504273 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.04
SNX25-202ENST00000504273 NKX1-1Q15270 411 aaPredicted RBP8.52□□□□□ -1.04
SNX25-202ENST00000504273 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.04
SNX25-202ENST00000504273 CWC27Q6UX04 472 aaKnown RBP8.52□□□□□ -1.04
SNX25-202ENST00000504273 STRN4Q9NRL3 753 aa8.52□□□□□ -1.04
SNX25-202ENST00000504273 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
SNX25-202ENST00000504273 AACSQ86V21 672 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 CCDC8Q9H0W5 538 aaPredicted RBP8.52□□□□□ -1.05
SNX25-202ENST00000504273 SNRKQ9NRH2 765 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 NHSQ6T4R5 1651 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 GOLGA6L3A6NEY3 463 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 CPA1P15085 419 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 CABP4P57796 275 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 NUCB2P80303 420 aa8.52□□□□□ -1.05
SNX25-202ENST00000504273 PAXIP1Q6ZW49 1069 aaPredicted RBP8.52□□□□□ -1.05
SNX25-202ENST00000504273 CLASRPQ8N2M8 674 aaKnown RBP8.52□□□□□ -1.05
SNX25-202ENST00000504273 ATP5J2-PTCD1G3V325 749 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 BRD1O95696 1058 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 FOXO4P98177 505 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 ADCK5Q3MIX3 580 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 GPT2Q8TD30 523 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 AKT1S1Q96B36 256 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 NAP1L5Q96NT1 182 aaPredicted RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 SIL1Q9H173 461 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 RUFY3Q7L099 469 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 FAM227BQ96M60 508 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 COPRSQ9NQ92 184 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 RPAP1Q9BWH6 1393 aaPredicted RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 LAMA4Q16363 1823 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 LARGE1O95461 756 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 ST3GAL1Q11201 340 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 OS9Q13438 667 aaPredicted RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 NECTIN1Q15223 517 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 NOL8Q76FK4 1167 aaKnown RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
SNX25-202ENST00000504273 TAF6LQ9Y6J9 622 aa8.51□□□□□ -1.05
SNX25-202ENST00000504273 CHGBP05060 677 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 KLHL40Q2TBA0 621 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 PLBD2Q8NHP8 589 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 INTS4Q96HW7 963 aaKnown RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 LARP6Q9BRS8 491 aaKnown RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 RNF216Q9NWF9 866 aaPredicted RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 H7C1W4 665 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms