RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TDRD7Q8NHU6 1098 aaKnown RBP17.73■□□□□ 0.43
SNF8-203ENST00000504000 ANKRD24Q8TF21 1146 aa17.73■□□□□ 0.43
SNF8-203ENST00000504000 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
SNF8-203ENST00000504000 DACT1Q9NYF0 836 aa17.73■□□□□ 0.43
SNF8-203ENST00000504000 TLR7Q9NYK1 1049 aaKnown RBP17.73■□□□□ 0.43
SNF8-203ENST00000504000 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
SNF8-203ENST00000504000 ESCO1Q5FWF5 840 aa17.72■□□□□ 0.43
SNF8-203ENST00000504000 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
SNF8-203ENST00000504000 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
SNF8-203ENST00000504000 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 ZNF589Q86UQ0 364 aaPredicted RBP17.71■□□□□ 0.43
SNF8-203ENST00000504000 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 CFAP45Q9UL16 551 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 ABCC6O95255 1503 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 SETD1BQ9UPS6 1966 aaKnown RBP17.71■□□□□ 0.43
SNF8-203ENST00000504000 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
SNF8-203ENST00000504000 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
SNF8-203ENST00000504000 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 ANKLE2Q86XL3 938 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 PLA2G4DQ86XP0 818 aa17.71■□□□□ 0.43
SNF8-203ENST00000504000 ATL3Q6DD88 541 aa17.7■□□□□ 0.42
SNF8-203ENST00000504000 MPNDQ8N594 471 aa17.7■□□□□ 0.42
SNF8-203ENST00000504000 PKNOX2Q96KN3 472 aa17.7■□□□□ 0.42
SNF8-203ENST00000504000 CBX8Q9HC52 389 aa17.7■□□□□ 0.42
SNF8-203ENST00000504000 PYCARDQ9ULZ3 195 aa17.7■□□□□ 0.42
SNF8-203ENST00000504000 CDC25BP30305 580 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
SNF8-203ENST00000504000 RESTQ13127 1097 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 DDX54Q8TDD1 881 aaKnown RBP17.69■□□□□ 0.42
SNF8-203ENST00000504000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNF8-203ENST00000504000 CTAGE5O15320 804 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 CTIFO43310 598 aaKnown RBP17.69■□□□□ 0.42
SNF8-203ENST00000504000 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
SNF8-203ENST00000504000 ANO6Q4KMQ2 910 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
SNF8-203ENST00000504000 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
SNF8-203ENST00000504000 FAM173BQ6P4H8 233 aa17.68■□□□□ 0.42
SNF8-203ENST00000504000 C17orf53Q8N3J3 647 aaPredicted RBP17.68■□□□□ 0.42
SNF8-203ENST00000504000 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
SNF8-203ENST00000504000 HAUS7Q99871 368 aa17.68■□□□□ 0.42
SNF8-203ENST00000504000 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
SNF8-203ENST00000504000 TAF6LQ9Y6J9 622 aa17.68■□□□□ 0.42
SNF8-203ENST00000504000 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
SNF8-203ENST00000504000 ZNF75DP51815 510 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
SNF8-203ENST00000504000 SYCP1Q15431 976 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 CAMK4Q16566 473 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 NAA16Q6N069 864 aaPredicted RBP17.67■□□□□ 0.42
SNF8-203ENST00000504000 SARM1Q6SZW1 724 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 PGBD1Q96JS3 809 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 SIL1Q9H173 461 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 TMEM94Q12767 1356 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
SNF8-203ENST00000504000 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
SNF8-203ENST00000504000 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
SNF8-203ENST00000504000 C5P01031 1676 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 ERBB3P21860 1342 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 PFKFB2O60825 505 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 ZNF165P49910 485 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 SPC24Q8NBT2 197 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
SNF8-203ENST00000504000 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
SNF8-203ENST00000504000 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 NR1I2O75469 434 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 ANKRD7Q92527 254 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 BRF1Q92994 677 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 RCOR1Q9UKL0 485 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 ZNF609O15014 1411 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 PTGS1P23219 599 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 Q6ZUG5 572 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 MYD88Q99836 296 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 AXIN2Q9Y2T1 843 aa17.65■□□□□ 0.42
SNF8-203ENST00000504000 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
SNF8-203ENST00000504000 H3BQV1 296 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 NEMFO60524 1076 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 CYP21A2P08686 494 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 CCDC186Q7Z3E2 898 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
SNF8-203ENST00000504000 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms