RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
SDHA-203ENST00000503674 MRFAP1L1Q96HT8 127 aa16.42■□□□□ 0.22
SDHA-203ENST00000503674 KCND1Q9NSA2 647 aa16.42■□□□□ 0.22
SDHA-203ENST00000503674 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
SDHA-203ENST00000503674 TRMT1Q9NXH9 659 aaKnown RBP16.42■□□□□ 0.22
SDHA-203ENST00000503674 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 ERCC6LQ2NKX8 1250 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
SDHA-203ENST00000503674 MED1Q15648 1581 aaPredicted RBP16.41■□□□□ 0.22
SDHA-203ENST00000503674 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
SDHA-203ENST00000503674 GCP02774 474 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 CLCN6P51797 869 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 ME3Q16798 604 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 ARHGEF25Q86VW2 580 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
SDHA-203ENST00000503674 L2HGDHQ9H9P8 463 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
SDHA-203ENST00000503674 NPHP3Q7Z494 1330 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
SDHA-203ENST00000503674 PNMA6AP0CW24 399 aaPredicted RBP16.4■□□□□ 0.22
SDHA-203ENST00000503674 IQCB1Q15051 598 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 KRT28Q7Z3Y7 464 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 RGPD5Q99666 1765 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 CCDC69A6NI79 296 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 NR1I2O75469 434 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 LARP1BQ659C4 914 aaKnown RBP16.4■□□□□ 0.22
SDHA-203ENST00000503674 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
SDHA-203ENST00000503674 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.22
SDHA-203ENST00000503674 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 KDM3BQ7LBC6 1761 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 CAVIN2O95810 425 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 NBPF6Q5VWK0 638 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 NECAB1Q8N987 351 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 NBPF4Q96M43 638 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
SDHA-203ENST00000503674 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
SDHA-203ENST00000503674 GOLGA6L4A6NEF3 574 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 ATF3P18847 181 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 USP16Q9Y5T5 823 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
SDHA-203ENST00000503674 ZRANB2O95218 330 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDHA-203ENST00000503674 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 LEO1Q8WVC0 666 aaPredicted RBP16.38■□□□□ 0.21
SDHA-203ENST00000503674 LTBP4Q8N2S1 1624 aa16.38■□□□□ 0.21
SDHA-203ENST00000503674 GNAI3P08754 354 aa16.37■□□□□ 0.21
SDHA-203ENST00000503674 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
SDHA-203ENST00000503674 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
SDHA-203ENST00000503674 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
SDHA-203ENST00000503674 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
SDHA-203ENST00000503674 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
SDHA-203ENST00000503674 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
SDHA-203ENST00000503674 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
SDHA-203ENST00000503674 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
SDHA-203ENST00000503674 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
SDHA-203ENST00000503674 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
SDHA-203ENST00000503674 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
SDHA-203ENST00000503674 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
SDHA-203ENST00000503674 ARHGAP29Q52LW3 1261 aa16.35■□□□□ 0.21
SDHA-203ENST00000503674 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
SDHA-203ENST00000503674 KCNB2Q92953 911 aa16.35■□□□□ 0.21
SDHA-203ENST00000503674 ABCC6O95255 1503 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 PTH1RQ03431 593 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 SNW1Q13573 536 aaKnown RBP16.34■□□□□ 0.21
SDHA-203ENST00000503674 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 E4F1Q66K89 784 aaPredicted RBP16.34■□□□□ 0.21
SDHA-203ENST00000503674 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
SDHA-203ENST00000503674 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 TXLNBQ8N3L3 684 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 PDCP20941 246 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 EFCC1Q9HA90 598 aa16.34■□□□□ 0.21
SDHA-203ENST00000503674 COL18A1P39060 1754 aa16.33■□□□□ 0.21
SDHA-203ENST00000503674 SYT10Q6XYQ8 523 aa16.33■□□□□ 0.2
SDHA-203ENST00000503674 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
SDHA-203ENST00000503674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.33■□□□□ 0.2
SDHA-203ENST00000503674 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.2
SDHA-203ENST00000503674 ST5P78524 1137 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms