RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 G3V3G9 751 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 PER1O15534 1290 aaPredicted RBP6.78□□□□□ -1.32
HTT-202ENST00000502820 KCNQ3O43525 872 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 EGFRP00533 1210 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 HLFQ16534 295 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 DCAF8Q5TAQ9 597 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 SUPT20HQ8NEM7 779 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 CDCA5Q96FF9 252 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 GGA3Q9NZ52 723 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 USP16Q9Y5T5 823 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 HEG1Q9ULI3 1381 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 NRXN2Q9P2S2 1712 aa6.78□□□□□ -1.32
HTT-202ENST00000502820 COL4A5P29400 1685 aa6.77□□□□□ -1.32
HTT-202ENST00000502820 ASTN2O75129 1339 aaPredicted RBP6.77□□□□□ -1.32
HTT-202ENST00000502820 ECM2O94769 699 aaPredicted RBP6.77□□□□□ -1.33
HTT-202ENST00000502820 INTS3Q68E01 1043 aaKnown RBP6.77□□□□□ -1.33
HTT-202ENST00000502820 CLEC4GQ6UXB4 293 aa6.77□□□□□ -1.33
HTT-202ENST00000502820 REM2Q8IYK8 340 aaPredicted RBP6.77□□□□□ -1.33
HTT-202ENST00000502820 MPNDQ8N594 471 aa6.77□□□□□ -1.33
HTT-202ENST00000502820 NYXQ9GZU5 481 aa6.77□□□□□ -1.33
HTT-202ENST00000502820 RBM27Q9P2N5 1060 aaKnown RBP6.77□□□□□ -1.33
HTT-202ENST00000502820 PGAP2Q9UHJ9 254 aa6.77□□□□□ -1.33
HTT-202ENST00000502820 ZNF831Q5JPB2 1677 aa6.77□□□□□ -1.33
HTT-202ENST00000502820 KLRG2A4D1S0 409 aaPredicted RBP6.76□□□□□ -1.33
HTT-202ENST00000502820 PSMD14O00487 310 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 U2SURPO15042 1029 aaKnown RBP6.76□□□□□ -1.33
HTT-202ENST00000502820 DOK7Q18PE1 504 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 KIF4BQ2VIQ3 1234 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 GRIPAP1Q4V328 841 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 ANGEL2Q5VTE6 544 aaKnown RBP6.76□□□□□ -1.33
HTT-202ENST00000502820 R3HDMLQ9H3Y0 253 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 DBNDD1Q9H9R9 158 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 KNSTRNQ9Y448 316 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 ADAMTS7Q9UKP4 1686 aa6.76□□□□□ -1.33
HTT-202ENST00000502820 DICER1Q9UPY3 1922 aaKnown RBP6.76□□□□□ -1.33
HTT-202ENST00000502820 CACNA1SQ13698 1873 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 ABCC12Q96J65 1359 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 C6orf229H3BNL8 230 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 MYL6BP14649 208 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 IL13P35225 146 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 SREBF2Q12772 1141 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 TCIRG1Q13488 830 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 CD99L2Q8TCZ2 262 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 NLRP3Q96P20 1036 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 ZBTB3Q9H5J0 574 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 RRP7AQ9Y3A4 280 aaKnown RBP6.75□□□□□ -1.33
HTT-202ENST00000502820 ATP6V0A2Q9Y487 856 aa6.75□□□□□ -1.33
HTT-202ENST00000502820 YDJCA8MPS7 323 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 SCARF1Q14162 830 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 SUSD4Q5VX71 490 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 KIF6Q6ZMV9 814 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 C3orf67Q6ZVT6 689 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 IL17REQ8NFR9 667 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 CRAMP1Q96RY5 1269 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 KCNQ5Q9NR82 932 aa6.74□□□□□ -1.33
HTT-202ENST00000502820 NSFL1CQ9UNZ2 370 aaKnown RBP6.74□□□□□ -1.33
HTT-202ENST00000502820 WTIPA6NIX2 430 aaPredicted RBP6.73□□□□□ -1.33
HTT-202ENST00000502820 ANP32CO43423 234 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 SNRPA1P09661 255 aaKnown RBP6.73□□□□□ -1.33
HTT-202ENST00000502820 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 CRY2Q49AN0 593 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 SLC9C1Q4G0N8 1177 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 FBXW7Q969H0 707 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 LRCH3Q96II8 777 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 PTPN22Q9Y2R2 807 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 CDHR2Q9BYE9 1310 aa6.73□□□□□ -1.33
HTT-202ENST00000502820 ECE2O60344 883 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 HOXA10P31260 410 aaPredicted RBP6.72□□□□□ -1.33
HTT-202ENST00000502820 NF2P35240 595 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
HTT-202ENST00000502820 DDX46Q7L014 1031 aaKnown RBP6.72□□□□□ -1.33
HTT-202ENST00000502820 NBPF11Q86T75 865 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 VPS33BQ9H267 617 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 ABCC4O15439 1325 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 MRC1P22897 1456 aa6.72□□□□□ -1.33
HTT-202ENST00000502820 NBPF26B4DH59 902 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 DEKP35659 375 aaKnown RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 TM4SF4P48230 202 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 RTL5Q5HYW3 569 aaPredicted RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 TTLL7Q6ZT98 887 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 PPP1R42Q7Z4L9 355 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 SP8Q8IXZ3 490 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 SH3TC2Q8TF17 1288 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 UBE2Q2Q8WVN8 375 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 RTF1Q92541 710 aaKnown RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 DPF2Q92785 391 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 ERO1AQ96HE7 468 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.34
HTT-202ENST00000502820 PPP4R2Q9NY27 417 aa6.71□□□□□ -1.34
HTT-202ENST00000502820 MIS18AQ9NYP9 233 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms