RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 EYA1Q99502 592 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 SPON2Q9BUD6 331 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 TMEM134Q9H6X4 195 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 CASS4Q9NQ75 786 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 TSKSQ9UJT2 592 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 CD2APQ9Y5K6 639 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 EIF4BP23588 611 aaKnown RBP4.65□□□□□ -1.66
SUB1-202ENST00000502453 VPS72Q15906 364 aa4.65□□□□□ -1.66
SUB1-202ENST00000502453 RSPH9Q9H1X1 276 aaPredicted RBP4.65□□□□□ -1.66
SUB1-202ENST00000502453 TAGLN3Q9UI15 199 aa4.65□□□□□ -1.66
SUB1-202ENST00000502453 LHX6Q9UPM6 363 aa4.65□□□□□ -1.66
SUB1-202ENST00000502453 ZRANB2O95218 330 aaKnown RBP eCLIP4.65□□□□□ -1.67
SUB1-202ENST00000502453 NFKB2Q00653 900 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 INO80DQ53TQ3 878 aaPredicted RBP4.65□□□□□ -1.67
SUB1-202ENST00000502453 RUNDC1Q96C34 613 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.65□□□□□ -1.673e-6■■■■■ 37.3
SUB1-202ENST00000502453 PFDN2Q9UHV9 154 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 PRDM4Q9UKN5 801 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 ISY1Q9ULR0 285 aaKnown RBP4.65□□□□□ -1.67
SUB1-202ENST00000502453 AK5Q9Y6K8 562 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 FZD6O60353 706 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 MYCLP1P12525 358 aaPredicted RBP4.65□□□□□ -1.67
SUB1-202ENST00000502453 EPHB1P54762 984 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 SQSTM1Q13501 440 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 EGFL6Q8IUX8 553 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 CCDC89Q8N998 374 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 NGDNQ8NEJ9 315 aaKnown RBP4.65□□□□□ -1.67
SUB1-202ENST00000502453 PNMA3Q9UL41 463 aa4.65□□□□□ -1.67
SUB1-202ENST00000502453 ASMTLO95671 621 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 FUT2Q10981 343 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 ORC1Q13415 861 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 PROX2Q3B8N5 592 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 MAP7D1Q3KQU3 841 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 DDX46Q7L014 1031 aaKnown RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 PPARGC1BQ86YN6 1023 aaKnown RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 MAP10Q9P2G4 905 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 IRS4O14654 1257 aaPredicted RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 MYL3P08590 195 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 FAM163BP0C2L3 166 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 WEE1P30291 646 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 IL31Q6EBC2 164 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 TRAF7Q6Q0C0 670 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 SKAP1Q86WV1 359 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 SUGP1Q8IWZ8 645 aaKnown RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 CELF2-AS1Q8N7Q2 184 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 ANKRD42Q8N9B4 389 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 SP7Q8TDD2 431 aaPredicted RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 SLC39A13Q96H72 371 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 JPH4Q96JJ6 628 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 ZNF830Q96NB3 372 aaPredicted RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 ENAMQ9NRM1 1142 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 PDZRN3Q9UPQ7 1066 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 DNM1Q05193 864 aaKnown RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 SEPT6Q14141 434 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 MAPRE1Q15691 268 aaKnown RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 KANK3Q6NY19 840 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 PHTF2Q8N3S3 785 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 ATL2Q8NHH9 583 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 TTC8Q8TAM2 541 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 KBTBD4Q9NVX7 518 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 EVLQ9UI08 416 aaPredicted RBP4.64□□□□□ -1.67
SUB1-202ENST00000502453 UNC13AQ9UPW8 1703 aa4.64□□□□□ -1.67
SUB1-202ENST00000502453 MINDY4BA8MYZ0 360 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 KLF4O43474 513 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 SCP2P22307 547 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 CTHP32929 405 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 NEK3P51956 506 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 TEX19Q8NA77 164 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 HDAC5Q9UQL6 1122 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 NBPF7P0C2Y1 421 aaPredicted RBP4.63□□□□□ -1.67
SUB1-202ENST00000502453 CNGB1Q14028 1251 aaPredicted RBP4.63□□□□□ -1.67
SUB1-202ENST00000502453 TRPM4Q8TD43 1214 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 CARD10Q9BWT7 1032 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.63□□□□□ -1.67
SUB1-202ENST00000502453 NUB1Q9Y5A7 615 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GOLGA6CA6NDK9 693 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GOLGA6BA6NDN3 693 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GOLGA6DP0CG33 693 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 SLC4A3P48751 1232 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 CASC1Q6TDU7 716 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 PI16Q6UXB8 463 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 CCDC81Q6ZN84 652 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 OTUD6BQ8N6M0 293 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GOLGA6AQ9NYA3 693 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GUCY2FP51841 1108 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 LONRF1Q17RB8 773 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 PODNQ7Z5L7 613 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 SCG3Q8WXD2 468 aaKnown RBP4.63□□□□□ -1.67
SUB1-202ENST00000502453 MTMR8Q96EF0 704 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 GINM1Q9NU53 330 aa4.63□□□□□ -1.67
SUB1-202ENST00000502453 IGHA2P01877 340 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 CLCN6P51797 869 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.62□□□□□ -1.67
SUB1-202ENST00000502453 CCDC70Q6NSX1 233 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 CEP120Q8N960 986 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 CHAC2Q8WUX2 184 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 RELTQ969Z4 430 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 ATG3Q9NT62 314 aa4.62□□□□□ -1.67
SUB1-202ENST00000502453 RABGAP1Q9Y3P9 1069 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms