RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 C10orf71Q711Q0 1435 aa24.43■■□□□ 1.5
LINC01550-201ENST00000499006 SF3B3Q15393 1217 aaKnown RBP24.43■■□□□ 1.5
LINC01550-201ENST00000499006 NLRP3Q96P20 1036 aa24.43■■□□□ 1.5
LINC01550-201ENST00000499006 BRIP1Q9BX63 1249 aa24.43■■□□□ 1.5
LINC01550-201ENST00000499006 SPEF2Q9C093 1822 aa24.42■■□□□ 1.5
LINC01550-201ENST00000499006 DLEC1Q9Y238 1755 aa24.42■■□□□ 1.5
LINC01550-201ENST00000499006 KLRG2A4D1S0 409 aaPredicted RBP24.42■■□□□ 1.5
LINC01550-201ENST00000499006 KIAA1551Q9HCM1 1747 aa24.41■■□□□ 1.5
LINC01550-201ENST00000499006 PNMA6EA0A0J9YXQ4 647 aa24.41■■□□□ 1.5
LINC01550-201ENST00000499006 RTL9Q8NET4 1388 aa24.41■■□□□ 1.5
LINC01550-201ENST00000499006 POLA2Q14181 598 aa24.4■■□□□ 1.5
LINC01550-201ENST00000499006 SSH3Q8TE77 659 aa24.4■■□□□ 1.5
LINC01550-201ENST00000499006 SPON1Q9HCB6 807 aa24.4■■□□□ 1.5
LINC01550-201ENST00000499006 CRY2Q49AN0 593 aa24.39■■□□□ 1.5
LINC01550-201ENST00000499006 GREM2Q9H772 168 aa24.39■■□□□ 1.5
LINC01550-201ENST00000499006 SRGAP3O43295 1099 aa24.38■■□□□ 1.49
LINC01550-201ENST00000499006 FAM161AQ3B820 660 aa24.38■■□□□ 1.49
LINC01550-201ENST00000499006 CCDC152Q4G0S7 254 aa24.38■■□□□ 1.49
LINC01550-201ENST00000499006 COL4A1P02462 1669 aa24.38■■□□□ 1.49
LINC01550-201ENST00000499006 CACNA1SQ13698 1873 aa24.38■■□□□ 1.49
LINC01550-201ENST00000499006 RFX5P48382 616 aaPredicted RBP24.38■■□□□ 1.49
LINC01550-201ENST00000499006 PDE6BP35913 854 aa24.37■■□□□ 1.49
LINC01550-201ENST00000499006 HDAC1Q13547 482 aaPredicted RBP24.37■■□□□ 1.49
LINC01550-201ENST00000499006 CCDC85AQ96PX6 553 aaPredicted RBP24.37■■□□□ 1.49
LINC01550-201ENST00000499006 PPP4R2Q9NY27 417 aa24.37■■□□□ 1.49
LINC01550-201ENST00000499006 GTF3C3Q9Y5Q9 886 aa24.37■■□□□ 1.49
LINC01550-201ENST00000499006 CHMP3Q9Y3E7 222 aa24.36■■□□□ 1.49
LINC01550-201ENST00000499006 BRCA1P38398 1863 aaKnown RBP24.35■■□□□ 1.49
LINC01550-201ENST00000499006 HMMRO75330 724 aa24.35■■□□□ 1.49
LINC01550-201ENST00000499006 ITGA6P23229 1130 aa24.35■■□□□ 1.49
LINC01550-201ENST00000499006 LRP5O75197 1615 aa24.35■■□□□ 1.49
LINC01550-201ENST00000499006 IFIT5Q13325 482 aaKnown RBP24.34■■□□□ 1.49
LINC01550-201ENST00000499006 CCDC57Q2TAC2 916 aa24.34■■□□□ 1.49
LINC01550-201ENST00000499006 IGHDP01880 384 aa24.33■■□□□ 1.49
LINC01550-201ENST00000499006 SRGNP10124 158 aa24.33■■□□□ 1.49
LINC01550-201ENST00000499006 PTPN12Q05209 780 aaKnown RBP24.33■■□□□ 1.49
LINC01550-201ENST00000499006 SEC31BQ9NQW1 1179 aa24.33■■□□□ 1.49
LINC01550-201ENST00000499006 A0A1B0GUL6 1792 aa24.33■■□□□ 1.48
LINC01550-201ENST00000499006 ANKRD18BA2A2Z9 1011 aa24.32■■□□□ 1.48
LINC01550-201ENST00000499006 HOXA10P31260 410 aaPredicted RBP24.32■■□□□ 1.48
LINC01550-201ENST00000499006 RWDD1Q9H446 243 aaPredicted RBP24.32■■□□□ 1.48
LINC01550-201ENST00000499006 COPRSQ9NQ92 184 aa24.32■■□□□ 1.48
LINC01550-201ENST00000499006 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
LINC01550-201ENST00000499006 KLHDC4Q8TBB5 520 aa24.32■■□□□ 1.48
LINC01550-201ENST00000499006 RPGRQ92834 1020 aaKnown RBP24.32■■□□□ 1.48
LINC01550-201ENST00000499006 PA2G4Q9UQ80 394 aaKnown RBP24.31■■□□□ 1.48
LINC01550-201ENST00000499006 DDX46Q7L014 1031 aaKnown RBP24.3■■□□□ 1.48
LINC01550-201ENST00000499006 ZNF594Q96JF6 807 aaPredicted RBP24.3■■□□□ 1.48
LINC01550-201ENST00000499006 CCDC136Q96JN2 1154 aa24.3■■□□□ 1.48
LINC01550-201ENST00000499006 DCTPP1Q9H773 170 aa24.3■■□□□ 1.48
LINC01550-201ENST00000499006 NOP58Q9Y2X3 529 aaKnown RBP24.3■■□□□ 1.48
LINC01550-201ENST00000499006 CD2APQ9Y5K6 639 aa24.3■■□□□ 1.48
LINC01550-201ENST00000499006 H0YIN7 160 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 NPR1P16066 1061 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 C2CD5Q86YS7 1000 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 RBM17Q96I25 401 aaKnown RBP24.29■■□□□ 1.48
LINC01550-201ENST00000499006 CRAMP1Q96RY5 1269 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 CDC5LQ99459 802 aaKnown RBP24.29■■□□□ 1.48
LINC01550-201ENST00000499006 SLX4Q8IY92 1834 aa24.29■■□□□ 1.48
LINC01550-201ENST00000499006 TGFB2P61812 414 aa24.28■■□□□ 1.48
LINC01550-201ENST00000499006 B4GALNT3Q6L9W6 998 aa24.28■■□□□ 1.48
LINC01550-201ENST00000499006 CELF1Q92879 486 aaKnown RBP24.28■■□□□ 1.48
LINC01550-201ENST00000499006 CHRNA5P30532 468 aa24.27■■□□□ 1.48
LINC01550-201ENST00000499006 GRAPQ13588 217 aa24.27■■□□□ 1.48
LINC01550-201ENST00000499006 GRAPLQ8TC17 118 aaPredicted RBP24.27■■□□□ 1.48
LINC01550-201ENST00000499006 LRRC37AA6NMS7 1700 aa24.27■■□□□ 1.48
LINC01550-201ENST00000499006 KDM2BQ8NHM5 1336 aa24.27■■□□□ 1.48
LINC01550-201ENST00000499006 SURF6O75683 361 aaKnown RBP24.26■■□□□ 1.47
LINC01550-201ENST00000499006 KCNA3P22001 575 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 TAF7LQ5H9L4 462 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 STYK1Q6J9G0 422 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 FBXO3Q9UK99 471 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 SRCAPQ6ZRS2 3230 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
LINC01550-201ENST00000499006 ANKRD18AQ8IVF6 992 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 SMC5Q8IY18 1101 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 EXOC6BQ9Y2D4 811 aa24.26■■□□□ 1.47
LINC01550-201ENST00000499006 CIAO1O76071 339 aa24.25■■□□□ 1.47
LINC01550-201ENST00000499006 ATG9AQ7Z3C6 839 aa24.25■■□□□ 1.47
LINC01550-201ENST00000499006 GCC1Q96CN9 775 aa24.25■■□□□ 1.47
LINC01550-201ENST00000499006 PUS3Q9BZE2 481 aaKnown RBP24.25■■□□□ 1.47
LINC01550-201ENST00000499006 SIL1Q9H173 461 aa24.25■■□□□ 1.47
LINC01550-201ENST00000499006 EYA2O00167 538 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 DPEP1P16444 411 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 ALDH1B1P30837 517 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 IGHMBP2P38935 993 aaKnown RBP24.24■■□□□ 1.47
LINC01550-201ENST00000499006 LRRC24Q50LG9 513 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 LDHAL6AQ6ZMR3 332 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 BSDC1Q9NW68 430 aaPredicted RBP24.24■■□□□ 1.47
LINC01550-201ENST00000499006 RIPOR2Q9Y4F9 1068 aa24.24■■□□□ 1.47
LINC01550-201ENST00000499006 GOLGB1Q14789 3259 aaKnown RBP24.23■■□□□ 1.47
LINC01550-201ENST00000499006 A0A0G2JLW4 131 aa24.23■■□□□ 1.47
LINC01550-201ENST00000499006 MPHOSPH8Q99549 860 aa24.23■■□□□ 1.47
LINC01550-201ENST00000499006 BBOX1O75936 387 aa24.22■■□□□ 1.47
LINC01550-201ENST00000499006 G3BP1Q13283 466 aaKnown RBP eCLIP24.22■■□□□ 1.47
LINC01550-201ENST00000499006 HSP90AB4PQ58FF6 505 aa24.22■■□□□ 1.47
LINC01550-201ENST00000499006 ZNF622Q969S3 477 aaKnown RBP eCLIP24.22■■□□□ 1.47
LINC01550-201ENST00000499006 PPP1R1BQ9UD71 204 aaPredicted RBP24.22■■□□□ 1.47
LINC01550-201ENST00000499006 CENPQQ7L2Z9 268 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms