RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 FSD1Q9BTV5 496 aa15.43■□□□□ 0.06
NXF3-207ENST00000497850 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
NXF3-207ENST00000497850 CNPY2Q9Y2B0 182 aa15.43■□□□□ 0.06
NXF3-207ENST00000497850 RBM8AQ9Y5S9 174 aaKnown RBP15.43■□□□□ 0.06
NXF3-207ENST00000497850 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
NXF3-207ENST00000497850 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 WDR33Q9C0J8 1336 aaKnown RBP15.42■□□□□ 0.06
NXF3-207ENST00000497850 IGSF3O75054 1194 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 CHGBP05060 677 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 HDAC5Q9UQL6 1122 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 NECAB1Q8N987 351 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
NXF3-207ENST00000497850 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
NXF3-207ENST00000497850 SMC3Q9UQE7 1217 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
NXF3-207ENST00000497850 COL18A1P39060 1754 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
NXF3-207ENST00000497850 SYT1P21579 422 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 CABP4P57796 275 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 SNRPA1P09661 255 aaKnown RBP15.41■□□□□ 0.06
NXF3-207ENST00000497850 NECTIN1Q15223 517 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 CREB3L3Q68CJ9 461 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 LRP10Q7Z4F1 713 aa15.41■□□□□ 0.06
NXF3-207ENST00000497850 GJB2P29033 226 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 TFCP2Q12800 502 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
NXF3-207ENST00000497850 CYP46A1Q9Y6A2 500 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 STX6O43752 255 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
NXF3-207ENST00000497850 ST3GAL1Q11201 340 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 CHMP3Q9Y3E7 222 aa15.4■□□□□ 0.06
NXF3-207ENST00000497850 RIOK3O14730 519 aaKnown RBP15.39■□□□□ 0.05
NXF3-207ENST00000497850 ZBTB22O15209 634 aa15.39■□□□□ 0.05
NXF3-207ENST00000497850 CTIFO43310 598 aaKnown RBP15.39■□□□□ 0.05
NXF3-207ENST00000497850 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
NXF3-207ENST00000497850 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
NXF3-207ENST00000497850 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
NXF3-207ENST00000497850 USP25Q9UHP3 1055 aa15.39■□□□□ 0.05
NXF3-207ENST00000497850 A0A087WZG4 1122 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 SLC27A2O14975 620 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 FIBPO43427 364 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 ME3Q16798 604 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 FEZ1Q99689 392 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 ZSWIM6Q9HCJ5 1215 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.38■□□□□ 0.05
NXF3-207ENST00000497850 VGLL3A8MV65 326 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 HSPA2P54652 639 aa15.38■□□□□ 0.05
NXF3-207ENST00000497850 ZNF771Q7L3S4 317 aaPredicted RBP15.38■□□□□ 0.05
NXF3-207ENST00000497850 DNAJC2Q99543 621 aaKnown RBP15.38■□□□□ 0.05
NXF3-207ENST00000497850 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
NXF3-207ENST00000497850 ARFGEF2Q9Y6D5 1785 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 ZKSCAN1P17029 563 aaPredicted RBP15.37■□□□□ 0.05
NXF3-207ENST00000497850 PTPN12Q05209 780 aaKnown RBP15.37■□□□□ 0.05
NXF3-207ENST00000497850 VPS53Q5VIR6 699 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
NXF3-207ENST00000497850 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 VPS37CA5D8V6 355 aaPredicted RBP15.37■□□□□ 0.05
NXF3-207ENST00000497850 F13A1P00488 732 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 RFX5P48382 616 aaPredicted RBP15.37■□□□□ 0.05
NXF3-207ENST00000497850 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 OGFRQ9NZT2 677 aa15.37■□□□□ 0.05
NXF3-207ENST00000497850 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 ADCY5O95622 1261 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
NXF3-207ENST00000497850 TNNI3KQ59H18 835 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 DBNDD2Q9BQY9 259 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 FPGT-TNNI3KV9GXZ4 949 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 STK3Q13188 491 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 TTLL7Q6ZT98 887 aa15.36■□□□□ 0.05
NXF3-207ENST00000497850 SEC62Q99442 399 aaKnown RBP15.36■□□□□ 0.05
NXF3-207ENST00000497850 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 PHF14O94880 888 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 DNM1Q05193 864 aaKnown RBP15.35■□□□□ 0.05
NXF3-207ENST00000497850 SLFNL1Q499Z3 407 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
NXF3-207ENST00000497850 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 KCNB2Q92953 911 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
NXF3-207ENST00000497850 LMTK3Q96Q04 1460 aa15.35■□□□□ 0.05
NXF3-207ENST00000497850 HIP1O00291 1037 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 SPATA31A3Q5VYP0 1347 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 COL15A1P39059 1388 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 A1BGP04217 495 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
NXF3-207ENST00000497850 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 COPRSQ9NQ92 184 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 MTMR6Q9Y217 621 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 PKD1L3Q7Z443 1732 aa15.34■□□□□ 0.05
NXF3-207ENST00000497850 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.05
NXF3-207ENST00000497850 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.05
NXF3-207ENST00000497850 KCNF1Q9H3M0 494 aa15.33■□□□□ 0.05
NXF3-207ENST00000497850 ZBTB3Q9H5J0 574 aa15.33■□□□□ 0.05
NXF3-207ENST00000497850 MED23Q9ULK4 1368 aa15.33■□□□□ 0.04
NXF3-207ENST00000497850 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms