RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 OPLAHO14841 1288 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 H2AFB1P0C5Y9 115 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 H2AFB2P0C5Z0 115 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 YBX3P16989 372 aaKnown RBP eCLIP6.65□□□□□ -1.34
PSPC1-205ENST00000497722 TXKP42681 527 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 IDH3AP50213 366 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 NEUROD1Q13562 356 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 CCINQ13939 588 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 COX20Q5RI15 118 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 C8orf86Q6ZUL3 223 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 ZNF417Q8TAU3 575 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 BHMTQ93088 406 aa6.65□□□□□ -1.34
PSPC1-205ENST00000497722 ZNF587Q96SQ5 575 aaPredicted RBP6.65□□□□□ -1.34
PSPC1-205ENST00000497722 PAX4O43316 350 aa6.64□□□□□ -1.35
PSPC1-205ENST00000497722 MICAL2O94851 1124 aa6.64□□□□□ -1.35
PSPC1-205ENST00000497722 PRIMPOLQ96LW4 560 aa6.64□□□□□ -1.35
PSPC1-205ENST00000497722 SLAIN2Q9P270 581 aa6.64□□□□□ -1.35
PSPC1-205ENST00000497722 MAP3K6O95382 1288 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 ZFATQ9P243 1243 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 NAGPAQ9UK23 515 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 SLC6A14Q9UN76 642 aa6.63□□□□□ -1.35
PSPC1-205ENST00000497722 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
PSPC1-205ENST00000497722 PRMT3O60678 531 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 EGFRP00533 1210 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 NFKB1P19838 968 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 ARSDP51689 593 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 IFT43Q96FT9 208 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 SAP130Q9H0E3 1048 aa6.62□□□□□ -1.35
PSPC1-205ENST00000497722 DNAJB12Q9NXW2 375 aaKnown RBP6.62□□□□□ -1.35
PSPC1-205ENST00000497722 CXXC1Q9P0U4 656 aaPredicted RBP6.62□□□□□ -1.35
PSPC1-205ENST00000497722 ZBTB42B2RXF5 422 aa6.61□□□□□ -1.35
PSPC1-205ENST00000497722 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
PSPC1-205ENST00000497722 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
PSPC1-205ENST00000497722 CLP1Q92989 425 aaKnown RBP6.61□□□□□ -1.35
PSPC1-205ENST00000497722 PBXIP1Q96AQ6 731 aa6.61□□□□□ -1.35
PSPC1-205ENST00000497722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.35
PSPC1-205ENST00000497722 TNFRSF10BO14763 440 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 EPB42P16452 691 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 ETFBKMTQ8IXQ9 262 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 TRPM4Q8TD43 1214 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 UBE2OQ9C0C9 1292 aaKnown RBP6.6□□□□□ -1.35
PSPC1-205ENST00000497722 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
PSPC1-205ENST00000497722 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
PSPC1-205ENST00000497722 TARSP26639 723 aaKnown RBP6.59□□□□□ -1.35
PSPC1-205ENST00000497722 GRIK5Q16478 980 aa6.59□□□□□ -1.35
PSPC1-205ENST00000497722 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
PSPC1-205ENST00000497722 USP20Q9Y2K6 914 aa6.59□□□□□ -1.35
PSPC1-205ENST00000497722 LILRB5O75023 590 aa6.58□□□□□ -1.36
PSPC1-205ENST00000497722 ELNP15502 786 aa6.58□□□□□ -1.36
PSPC1-205ENST00000497722 AFF1P51825 1210 aaKnown RBP6.58□□□□□ -1.36
PSPC1-205ENST00000497722 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
PSPC1-205ENST00000497722 DHX32Q7L7V1 743 aaKnown RBP6.58□□□□□ -1.36
PSPC1-205ENST00000497722 PNMA5Q96PV4 448 aa6.58□□□□□ -1.36
PSPC1-205ENST00000497722 ARID3CA6NKF2 412 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 SASH3O75995 380 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
PSPC1-205ENST00000497722 TRIM28Q13263 835 aaKnown RBP6.57□□□□□ -1.36
PSPC1-205ENST00000497722 PSAPL1Q6NUJ1 521 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 LPIN3Q9BQK8 851 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 FRRS1LQ9P0K9 344 aa6.57□□□□□ -1.36
PSPC1-205ENST00000497722 COL17A1Q9UMD9 1497 aaPredicted RBP6.57□□□□□ -1.36
PSPC1-205ENST00000497722 ARID1BQ8NFD5 2236 aaPredicted RBP6.57□□□□□ -1.36
PSPC1-205ENST00000497722 GPLD1P80108 840 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 PLAURQ03405 335 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 KRT25Q7Z3Z0 450 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 NUDT8Q8WV74 236 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 TTC9Q92623 222 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 CCDC97Q96F63 343 aaPredicted RBP6.56□□□□□ -1.36
PSPC1-205ENST00000497722 FMNL2Q96PY5 1086 aa6.56□□□□□ -1.36
PSPC1-205ENST00000497722 JPH1Q9HDC5 661 aaPredicted RBP6.56□□□□□ -1.36
PSPC1-205ENST00000497722 TLR7Q9NYK1 1049 aaKnown RBP6.56□□□□□ -1.36
PSPC1-205ENST00000497722 A0A0A0MRY4 1105 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 C9orf172C9J069 976 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
PSPC1-205ENST00000497722 XYLBO75191 536 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 RARAP10276 462 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 BRD2P25440 801 aaKnown RBP6.55□□□□□ -1.36
PSPC1-205ENST00000497722 NRLP54845 237 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 TRIP4Q15650 581 aaPredicted RBP6.55□□□□□ -1.36
PSPC1-205ENST00000497722 PCSK7Q16549 785 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 RGL4Q8IZJ4 473 aa6.55□□□□□ -1.36
PSPC1-205ENST00000497722 SELPP16109 830 aa6.54□□□□□ -1.36
PSPC1-205ENST00000497722 GRIK4Q16099 956 aa6.54□□□□□ -1.36
PSPC1-205ENST00000497722 FAM35AQ86V20 835 aa6.54□□□□□ -1.36
PSPC1-205ENST00000497722 MKNK1Q9BUB5 465 aa6.54□□□□□ -1.36
PSPC1-205ENST00000497722 TMEM88BA6NKF7 163 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 ZBTB39O15060 712 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 MMP20O60882 483 aa6.53□□□□□ -1.36
PSPC1-205ENST00000497722 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms