RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 KRT25Q7Z3Z0 450 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 CSRNP1Q96S65 589 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
GARNL3-221ENST00000497703 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
GARNL3-221ENST00000497703 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 GPR25O00155 361 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 SASH3O75995 380 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 IGHA2P01877 340 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 RARAP10276 462 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 ALG1LQ6GMV1 187 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
GARNL3-221ENST00000497703 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-221ENST00000497703 GRNP28799 593 aaKnown RBP11.83□□□□□ -0.52
GARNL3-221ENST00000497703 RANGAP1P46060 587 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-221ENST00000497703 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
GARNL3-221ENST00000497703 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
GARNL3-221ENST00000497703 BHMTQ93088 406 aa11.83□□□□□ -0.52
GARNL3-221ENST00000497703 PHF20L1A8MW92 1017 aa11.82□□□□□ -0.52
GARNL3-221ENST00000497703 EIF1AYO14602 144 aaKnown RBP11.82□□□□□ -0.52
GARNL3-221ENST00000497703 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
GARNL3-221ENST00000497703 BMP4P12644 408 aa11.82□□□□□ -0.52
GARNL3-221ENST00000497703 ORC1Q13415 861 aa11.82□□□□□ -0.52
GARNL3-221ENST00000497703 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
GARNL3-221ENST00000497703 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
GARNL3-221ENST00000497703 PSAPP07602 524 aa11.81□□□□□ -0.52
GARNL3-221ENST00000497703 NFKB1P19838 968 aa11.81□□□□□ -0.52
GARNL3-221ENST00000497703 MX2P20592 715 aa11.81□□□□□ -0.52
GARNL3-221ENST00000497703 TARSP26639 723 aaKnown RBP11.81□□□□□ -0.52
GARNL3-221ENST00000497703 XPCQ01831 940 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-221ENST00000497703 FBF1Q8TES7 1133 aa11.81□□□□□ -0.52
GARNL3-221ENST00000497703 E9PSI1 815 aa11.8□□□□□ -0.52
GARNL3-221ENST00000497703 CES1P23141 567 aa11.8□□□□□ -0.52
GARNL3-221ENST00000497703 FOXD3Q9UJU5 478 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-221ENST00000497703 VEGFBP49765 207 aa11.79□□□□□ -0.52
GARNL3-221ENST00000497703 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
GARNL3-221ENST00000497703 PCSK7Q16549 785 aa11.78□□□□□ -0.52
GARNL3-221ENST00000497703 SLC30A3Q99726 388 aa11.78□□□□□ -0.52
GARNL3-221ENST00000497703 MRS2Q9HD23 443 aa11.78□□□□□ -0.52
GARNL3-221ENST00000497703 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
GARNL3-221ENST00000497703 H3BM21 787 aa11.77□□□□□ -0.53
GARNL3-221ENST00000497703 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
GARNL3-221ENST00000497703 CTBSQ01459 385 aa11.77□□□□□ -0.53
GARNL3-221ENST00000497703 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-221ENST00000497703 PLAURQ03405 335 aa11.76□□□□□ -0.53
GARNL3-221ENST00000497703 C1orf127Q8N9H9 656 aa11.76□□□□□ -0.53
GARNL3-221ENST00000497703 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
GARNL3-221ENST00000497703 TLR7Q9NYK1 1049 aaKnown RBP11.76□□□□□ -0.53
GARNL3-221ENST00000497703 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
GARNL3-221ENST00000497703 MMP20O60882 483 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 EDN3P14138 238 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 SOX18P35713 384 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 MAP2K3P46734 347 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 DHX32Q7L7V1 743 aaKnown RBP11.75□□□□□ -0.53
GARNL3-221ENST00000497703 OR13H1Q8NG92 308 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 FRMD6Q96NE9 622 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 AVENQ9NQS1 362 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-221ENST00000497703 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
GARNL3-221ENST00000497703 HYAL2Q12891 473 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 ZNF468Q5VIY5 522 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-221ENST00000497703 SYT9Q86SS6 491 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 CCDC74AQ96AQ1 378 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 MRRFQ96E11 262 aaKnown RBP11.74□□□□□ -0.53
GARNL3-221ENST00000497703 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
GARNL3-221ENST00000497703 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
GARNL3-221ENST00000497703 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
GARNL3-221ENST00000497703 TBC1D8BQ0IIM8 1120 aa11.73□□□□□ -0.53
GARNL3-221ENST00000497703 PSMD2Q13200 908 aa11.73□□□□□ -0.53
GARNL3-221ENST00000497703 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
GARNL3-221ENST00000497703 IRF7Q92985 503 aa11.73□□□□□ -0.53
GARNL3-221ENST00000497703 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
GARNL3-221ENST00000497703 WWC3Q9ULE0 1092 aa11.73□□□□□ -0.53
GARNL3-221ENST00000497703 EREGO14944 169 aa11.72□□□□□ -0.53
GARNL3-221ENST00000497703 ADH6P28332 368 aa11.72□□□□□ -0.53
GARNL3-221ENST00000497703 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
GARNL3-221ENST00000497703 CHRDQ9H2X0 955 aa11.72□□□□□ -0.53
GARNL3-221ENST00000497703 PARP2Q9UGN5 583 aa11.72□□□□□ -0.53
GARNL3-221ENST00000497703 SIN3BO75182 1162 aa11.71□□□□□ -0.53
GARNL3-221ENST00000497703 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-221ENST00000497703 NRLP54845 237 aa11.71□□□□□ -0.53
GARNL3-221ENST00000497703 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.53
GARNL3-221ENST00000497703 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
GARNL3-221ENST00000497703 KANSL3Q9P2N6 904 aa11.71□□□□□ -0.53
GARNL3-221ENST00000497703 ABCC9O60706 1549 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 VSIG8P0DPA2 414 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 ARAFP10398 606 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 GNA15P30679 374 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 GALNT12Q8IXK2 581 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 HCN2Q9UL51 889 aa11.7□□□□□ -0.54
GARNL3-221ENST00000497703 GIPC1O14908 333 aa11.69□□□□□ -0.54
GARNL3-221ENST00000497703 SORBS3O60504 671 aa11.69□□□□□ -0.54
GARNL3-221ENST00000497703 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-221ENST00000497703 PCBP4P57723 403 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms