RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EVI5LQ96CN4 794 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 IFT43Q96FT9 208 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 RPS6KC1Q96S38 1066 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 CEP89Q96ST8 783 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 RSRP1Q9BUV0 290 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
BRCA1-224ENST00000497488 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 TMEM260Q9NX78 707 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 CNTN3Q9P232 1028 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 MSRB2Q9Y3D2 182 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
BRCA1-224ENST00000497488 A6NHS1 94 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-224ENST00000497488 SMTNP53814 917 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 PPP4CP60510 307 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 HSP90AB4PQ58FF6 505 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 TSHZ1Q6ZSZ6 1077 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 C16orf86Q6ZW13 317 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 GPR152Q8TDT2 470 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 EAF1Q96JC9 268 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-224ENST00000497488 FEZ1Q99689 392 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 HOMER2Q9NSB8 354 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 R3HCC1Q9Y3T6 440 aaKnown RBP8.12□□□□□ -1.11
BRCA1-224ENST00000497488 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
BRCA1-224ENST00000497488 POTECB2RU33 542 aa8.11□□□□□ -1.11
BRCA1-224ENST00000497488 PPFIA4O75335 1185 aa8.11□□□□□ -1.11
BRCA1-224ENST00000497488 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-224ENST00000497488 COL9A2Q14055 689 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-224ENST00000497488 RTN1Q16799 776 aa8.11□□□□□ -1.11
BRCA1-224ENST00000497488 TTC16Q8NEE8 873 aa8.11□□□□□ -1.11
BRCA1-224ENST00000497488 RELTQ969Z4 430 aa8.11□□□□□ -1.11
BRCA1-224ENST00000497488 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
BRCA1-224ENST00000497488 EML1O00423 815 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 RPLP1P05386 114 aaKnown RBP8.1□□□□□ -1.11
BRCA1-224ENST00000497488 WNT7BP56706 349 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 SQSTM1Q13501 440 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 PWP1Q13610 501 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 ANAPC16Q96DE5 110 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 KLK14Q9P0G3 267 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 USP3Q9Y6I4 520 aa8.1□□□□□ -1.11
BRCA1-224ENST00000497488 HMGB1P1B2RPK0 211 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-224ENST00000497488 EIF4A3P38919 411 aaKnown RBP8.09□□□□□ -1.11
BRCA1-224ENST00000497488 IFRD2Q12894 506 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-224ENST00000497488 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
BRCA1-224ENST00000497488 SPTY2D1Q68D10 685 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-224ENST00000497488 CCSAPQ6IQ19 270 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-224ENST00000497488 NXPE4Q6UWF7 544 aa8.09□□□□□ -1.11
BRCA1-224ENST00000497488 CPLX3Q8WVH0 158 aa8.09□□□□□ -1.11
BRCA1-224ENST00000497488 SERTM1A2A2V5 107 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 GNRH1P01148 92 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 CENPBP07199 599 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-224ENST00000497488 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
BRCA1-224ENST00000497488 TKFCQ3LXA3 575 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 SH3PXD2AQ5TCZ1 1133 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 KRT26Q7Z3Y9 468 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 TREML1Q86YW5 311 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 ZNF296Q8WUU4 475 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-224ENST00000497488 EMID1Q96A84 441 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-224ENST00000497488 NT5C1AQ9BXI3 368 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 BCO2Q9BYV7 579 aa8.08□□□□□ -1.12
BRCA1-224ENST00000497488 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-224ENST00000497488 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 SMAD7O15105 426 aaKnown RBP8.07□□□□□ -1.12
BRCA1-224ENST00000497488 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 UBE4AQ14139 1066 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 MAP9Q49MG5 647 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 RAVER1Q8IY67 606 aaKnown RBP8.07□□□□□ -1.12
BRCA1-224ENST00000497488 CELF2-AS1Q8N7Q2 184 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 TRIM52Q96A61 297 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 TMEM74Q96NL1 305 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 LEMD3Q9Y2U8 911 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 MAP4K5Q9Y4K4 846 aa8.07□□□□□ -1.12
BRCA1-224ENST00000497488 ADH1BP00325 375 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 PAX3P23760 479 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 GBP2P32456 591 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-224ENST00000497488 CDKN1CP49918 316 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-224ENST00000497488 RASGRF1Q13972 1273 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 TEAD4Q15561 434 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 PCNX4Q63HM2 1172 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 KCNQ5Q9NR82 932 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 TERF2IPQ9NYB0 399 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
BRCA1-224ENST00000497488 F6X3S4 739 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 KIF3BO15066 747 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 PDPK1O15530 556 aa8.05□□□□□ -1.12
BRCA1-224ENST00000497488 EVA1CP58658 441 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms