RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 BRD1O95696 1058 aa9.48□□□□□ -0.89
MSH5-219ENST00000497269 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
MSH5-219ENST00000497269 SUSD3Q96L08 255 aa9.48□□□□□ -0.89
MSH5-219ENST00000497269 DIP2CQ9Y2E4 1556 aa9.47□□□□□ -0.89
MSH5-219ENST00000497269 ABCA6Q8N139 1617 aa9.47□□□□□ -0.89
MSH5-219ENST00000497269 DCDC2BA2VCK2 349 aa9.47□□□□□ -0.89
MSH5-219ENST00000497269 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
MSH5-219ENST00000497269 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
MSH5-219ENST00000497269 SV2AQ7L0J3 742 aa9.46□□□□□ -0.9
MSH5-219ENST00000497269 ZNF775Q96BV0 537 aaPredicted RBP9.46□□□□□ -0.9
MSH5-219ENST00000497269 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
MSH5-219ENST00000497269 DNMT3AQ9Y6K1 912 aaPredicted RBP9.46□□□□□ -0.9
MSH5-219ENST00000497269 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
MSH5-219ENST00000497269 ZNF644Q9H582 1327 aaPredicted RBP9.46□□□□□ -0.9
MSH5-219ENST00000497269 H3BM21 787 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 KHNYNO15037 678 aaKnown RBP9.45□□□□□ -0.9
MSH5-219ENST00000497269 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
MSH5-219ENST00000497269 GGT6Q6P531 493 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
MSH5-219ENST00000497269 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
MSH5-219ENST00000497269 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
MSH5-219ENST00000497269 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 FAM26DQ5JW98 314 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 ABHD17AQ96GS6 310 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 MYO19Q96H55 970 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
MSH5-219ENST00000497269 ERBB4Q15303 1308 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 UHRF1BP1Q6BDS2 1440 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 KDM5CP41229 1560 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 PREX1Q8TCU6 1659 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 ITSN2Q9NZM3 1697 aa9.44□□□□□ -0.9
MSH5-219ENST00000497269 SUPT6HQ7KZ85 1726 aaKnown RBP9.44□□□□□ -0.9
MSH5-219ENST00000497269 STRCQ7RTU9 1775 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 KIDINS220Q9ULH0 1771 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 C3P01024 1663 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 ABCC1P33527 1531 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 CCDC18Q5T9S5 1454 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 H3BRB1 525 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 TNFRSF10BO14763 440 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
MSH5-219ENST00000497269 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
MSH5-219ENST00000497269 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
MSH5-219ENST00000497269 TUT1Q9H6E5 874 aaKnown RBP9.43□□□□□ -0.9
MSH5-219ENST00000497269 USP20Q9Y2K6 914 aa9.43□□□□□ -0.9
MSH5-219ENST00000497269 SAMD9LQ8IVG5 1584 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 SYCP2Q9BX26 1530 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 MLH3Q9UHC1 1453 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 LOC105371045A0A1W2PR82 267 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 MPSTP25325 297 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 NLRP8Q86W28 1048 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 HELQQ8TDG4 1101 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 ANKIB1Q9P2G1 1089 aa9.42□□□□□ -0.9
MSH5-219ENST00000497269 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
MSH5-219ENST00000497269 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 BNIP3LO60238 219 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 BRD2P25440 801 aaKnown RBP9.41□□□□□ -0.9
MSH5-219ENST00000497269 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 TREML1Q86YW5 311 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 ETFBKMTQ8IXQ9 262 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
MSH5-219ENST00000497269 TGFBR3LH3BV60 316 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 IDH3AP50213 366 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 KCNA1Q09470 495 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
MSH5-219ENST00000497269 AAMPQ13685 434 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
MSH5-219ENST00000497269 FIGNL1Q6PIW4 674 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 ATCAYQ86WG3 371 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 GLYCTKQ8IVS8 523 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 BRD7Q9NPI1 651 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 STIM2Q9P246 746 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 PCDHGC4Q9Y5F7 938 aa9.4□□□□□ -0.9
MSH5-219ENST00000497269 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.91
MSH5-219ENST00000497269 ZMYM3Q14202 1370 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 ZBTB39O15060 712 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 MICAL2O94851 1124 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
MSH5-219ENST00000497269 CD33P20138 364 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 TYRO3Q06418 890 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
MSH5-219ENST00000497269 HIF1AQ16665 826 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
MSH5-219ENST00000497269 IRF7Q92985 503 aa9.39□□□□□ -0.91
MSH5-219ENST00000497269 GPC6Q9Y625 555 aaPredicted RBP9.39□□□□□ -0.91
MSH5-219ENST00000497269 WFS1O76024 890 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 SFSWAPQ12872 951 aaKnown RBP9.38□□□□□ -0.91
MSH5-219ENST00000497269 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 RGL4Q8IZJ4 473 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms