RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 CDC25BP30305 580 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 TXLNAP40222 546 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 NEDD9Q14511 834 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 CEP85LQ5SZL2 805 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 TRIM66O15016 1216 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 SYKP43405 635 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 FAM160A1Q05DH4 1040 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 IFFO1Q0D2I5 559 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 CCDC102BQ68D86 513 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 CDKL5O76039 1030 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 POLR3DP05423 398 aaPredicted RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 HLTFQ14527 1009 aaKnown RBP eCLIP10.09□□□□□ -0.796e-10■■□□□ 11.9
MACF1-224ENST00000496804 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 TAF4BQ92750 862 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 NAA15Q9BXJ9 866 aaKnown RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 MED4Q9NPJ6 270 aa10.09□□□□□ -0.79
MACF1-224ENST00000496804 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.09□□□□□ -0.79
MACF1-224ENST00000496804 HMGB1P09429 215 aaKnown RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 SPATS2LQ9NUQ6 558 aaKnown RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 CLSTN1O94985 981 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 SRLQ86TD4 932 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 ORC3Q9UBD5 711 aaPredicted RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 VAMP4O75379 141 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 FANCCQ00597 558 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 JPH2Q9BR39 696 aaPredicted RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 CPA1P15085 419 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 ARFGAP2Q8N6H7 521 aa10.08□□□□□ -0.8
MACF1-224ENST00000496804 XPO4Q9C0E2 1151 aaKnown RBP10.08□□□□□ -0.8
MACF1-224ENST00000496804 KIF5BP33176 963 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 SPECC1Q5M775 1068 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 TADA2BQ86TJ2 420 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 HMG20BQ9P0W2 317 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 RBM8AQ9Y5S9 174 aaKnown RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 TCOF1Q13428 1488 aaKnown RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 CCT5P48643 541 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 MYL5Q02045 173 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 BCAS4Q8TDM0 211 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 NEK1Q96PY6 1258 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 FAN1Q9Y2M0 1017 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 NPC1L1Q9UHC9 1359 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 MARCH6O60337 910 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 HDGFP51858 240 aaKnown RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 GYS2P54840 703 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 CABS1Q96KC9 395 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 CAPZA3Q96KX2 299 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 ECHDC1Q9NTX5 307 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 BIVM-ERCC5R4GMW8 1640 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 ANKRD65E5RJM6 399 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 GUCY2CP25092 1073 aa10.07□□□□□ -0.8
MACF1-224ENST00000496804 RBBP5Q15291 538 aaKnown RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 NAPGQ99747 312 aaPredicted RBP10.07□□□□□ -0.8
MACF1-224ENST00000496804 GOLGA6BA6NDN3 693 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 LARP1Q6PKG0 1096 aaKnown RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 CCDC113Q9H0I3 377 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 NSD2O96028 1365 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 PEX19P40855 299 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 CUL4AQ13619 759 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 ANKS4BQ8N8V4 417 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 ZCCHC17Q9NP64 241 aaKnown RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 MYCNP04198 464 aaPredicted RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 EPS15P42566 896 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 ALS2CR12Q96Q35 445 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 U3KPZ7 1027 aaPredicted RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 CCDC151A5D8V7 595 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 PPFIA3O75145 1194 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 SUFUQ9UMX1 484 aa10.06□□□□□ -0.8
MACF1-224ENST00000496804 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.06□□□□□ -0.8
MACF1-224ENST00000496804 TTC41PQ6P2S7 1318 aa10.05□□□□□ -0.8
MACF1-224ENST00000496804 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
MACF1-224ENST00000496804 N4BP3O15049 544 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms