RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 C1orf115Q9H7X2 142 aa22.98■■□□□ 1.27
TSSC4-210ENST00000496468 CACNA1SQ13698 1873 aa22.98■■□□□ 1.27
TSSC4-210ENST00000496468 BRCA1P38398 1863 aaKnown RBP22.97■■□□□ 1.27
TSSC4-210ENST00000496468 H0YIN7 160 aa22.97■■□□□ 1.27
TSSC4-210ENST00000496468 TGFB2P61812 414 aa22.97■■□□□ 1.27
TSSC4-210ENST00000496468 SF3B3Q15393 1217 aaKnown RBP22.97■■□□□ 1.27
TSSC4-210ENST00000496468 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
TSSC4-210ENST00000496468 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
TSSC4-210ENST00000496468 CHMP3Q9Y3E7 222 aa22.97■■□□□ 1.27
TSSC4-210ENST00000496468 RTL9Q8NET4 1388 aa22.97■■□□□ 1.27
TSSC4-210ENST00000496468 CHRNA5P30532 468 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 FAM161AQ3B820 660 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 RABL6Q3YEC7 729 aaPredicted RBP22.96■■□□□ 1.27
TSSC4-210ENST00000496468 LMBR1LQ6UX01 489 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 ANKRD44Q8N8A2 993 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 TTLL11Q8NHH1 800 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 SPEF2Q9C093 1822 aa22.96■■□□□ 1.27
TSSC4-210ENST00000496468 NEFLP07196 543 aa22.95■■□□□ 1.26
TSSC4-210ENST00000496468 SRGNP10124 158 aa22.95■■□□□ 1.26
TSSC4-210ENST00000496468 NPR1P16066 1061 aa22.95■■□□□ 1.26
TSSC4-210ENST00000496468 MASTLQ96GX5 879 aa22.95■■□□□ 1.26
TSSC4-210ENST00000496468 DPEP1P16444 411 aa22.94■■□□□ 1.26
TSSC4-210ENST00000496468 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
TSSC4-210ENST00000496468 RBM17Q96I25 401 aaKnown RBP22.94■■□□□ 1.26
TSSC4-210ENST00000496468 GREM2Q9H772 168 aa22.94■■□□□ 1.26
TSSC4-210ENST00000496468 CSF1RP07333 972 aa22.93■■□□□ 1.26
TSSC4-210ENST00000496468 STYK1Q6J9G0 422 aa22.93■■□□□ 1.26
TSSC4-210ENST00000496468 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
TSSC4-210ENST00000496468 EXOC6Q8TAG9 804 aa22.93■■□□□ 1.26
TSSC4-210ENST00000496468 ZNF622Q969S3 477 aaKnown RBP eCLIP22.93■■□□□ 1.26
TSSC4-210ENST00000496468 COL4A1P02462 1669 aa22.93■■□□□ 1.26
TSSC4-210ENST00000496468 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
TSSC4-210ENST00000496468 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
TSSC4-210ENST00000496468 ITGA6P23229 1130 aa22.91■■□□□ 1.26
TSSC4-210ENST00000496468 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
TSSC4-210ENST00000496468 IFIT5Q13325 482 aaKnown RBP22.91■■□□□ 1.26
TSSC4-210ENST00000496468 TAF1P21675 1872 aa22.91■■□□□ 1.26
TSSC4-210ENST00000496468 ANKRD18BA2A2Z9 1011 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 MTX1Q13505 466 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 GRAPQ13588 217 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 AAMPQ13685 434 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 CCDC57Q2TAC2 916 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 CEP85Q6P2H3 762 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 GRAPLQ8TC17 118 aaPredicted RBP22.9■■□□□ 1.26
TSSC4-210ENST00000496468 CDC5LQ99459 802 aaKnown RBP22.9■■□□□ 1.26
TSSC4-210ENST00000496468 SYT17Q9BSW7 474 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 LRRC37AA6NMS7 1700 aa22.9■■□□□ 1.26
TSSC4-210ENST00000496468 SRGAP3O43295 1099 aa22.89■■□□□ 1.25
TSSC4-210ENST00000496468 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.25
TSSC4-210ENST00000496468 CNKSR1Q969H4 720 aa22.89■■□□□ 1.25
TSSC4-210ENST00000496468 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
TSSC4-210ENST00000496468 SEC31BQ9NQW1 1179 aa22.89■■□□□ 1.25
TSSC4-210ENST00000496468 KCNA3P22001 575 aa22.88■■□□□ 1.25
TSSC4-210ENST00000496468 ALDH1B1P30837 517 aa22.88■■□□□ 1.25
TSSC4-210ENST00000496468 PRPF40BQ6NWY9 871 aaKnown RBP22.87■■□□□ 1.25
TSSC4-210ENST00000496468 ANKRD18AQ8IVF6 992 aa22.87■■□□□ 1.25
TSSC4-210ENST00000496468 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
TSSC4-210ENST00000496468 SLX4Q8IY92 1834 aa22.87■■□□□ 1.25
TSSC4-210ENST00000496468 PNMA6EA0A0J9YXQ4 647 aa22.86■■□□□ 1.25
TSSC4-210ENST00000496468 PPEF1O14829 653 aaPredicted RBP22.86■■□□□ 1.25
TSSC4-210ENST00000496468 IGHMBP2P38935 993 aaKnown RBP22.86■■□□□ 1.25
TSSC4-210ENST00000496468 TTLL6Q8N841 843 aa22.86■■□□□ 1.25
TSSC4-210ENST00000496468 CELF1Q92879 486 aaKnown RBP22.86■■□□□ 1.25
TSSC4-210ENST00000496468 ARFGEF1Q9Y6D6 1849 aa22.85■■□□□ 1.25
TSSC4-210ENST00000496468 RPAP2Q8IXW5 612 aaPredicted RBP22.85■■□□□ 1.25
TSSC4-210ENST00000496468 WWC3Q9ULE0 1092 aa22.85■■□□□ 1.25
TSSC4-210ENST00000496468 A0A1B0GUL6 1792 aa22.84■■□□□ 1.25
TSSC4-210ENST00000496468 HMMRO75330 724 aa22.84■■□□□ 1.25
TSSC4-210ENST00000496468 ATP8B2P98198 1209 aa22.84■■□□□ 1.25
TSSC4-210ENST00000496468 DALRD3Q5D0E6 543 aaKnown RBP22.84■■□□□ 1.25
TSSC4-210ENST00000496468 RFX5P48382 616 aaPredicted RBP22.83■■□□□ 1.25
TSSC4-210ENST00000496468 TMC4Q7Z404 712 aa22.83■■□□□ 1.25
TSSC4-210ENST00000496468 ZNF594Q96JF6 807 aaPredicted RBP22.83■■□□□ 1.25
TSSC4-210ENST00000496468 MPHOSPH8Q99549 860 aa22.83■■□□□ 1.25
TSSC4-210ENST00000496468 BBOX1O75936 387 aa22.82■■□□□ 1.24
TSSC4-210ENST00000496468 RPS8P62241 208 aaKnown RBP22.82■■□□□ 1.24
TSSC4-210ENST00000496468 POLA2Q14181 598 aa22.82■■□□□ 1.24
TSSC4-210ENST00000496468 KLHDC4Q8TBB5 520 aa22.82■■□□□ 1.24
TSSC4-210ENST00000496468 SSH3Q8TE77 659 aa22.82■■□□□ 1.24
TSSC4-210ENST00000496468 BCS1LQ9Y276 419 aa22.81■■□□□ 1.24
TSSC4-210ENST00000496468 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
TSSC4-210ENST00000496468 PTPN12Q05209 780 aaKnown RBP22.8■■□□□ 1.24
TSSC4-210ENST00000496468 SIRT2Q8IXJ6 389 aa22.8■■□□□ 1.24
TSSC4-210ENST00000496468 CNNM1Q9NRU3 951 aa22.8■■□□□ 1.24
TSSC4-210ENST00000496468 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
TSSC4-210ENST00000496468 PA2G4Q9UQ80 394 aaKnown RBP22.8■■□□□ 1.24
TSSC4-210ENST00000496468 LDHAL6AQ6ZMR3 332 aa22.79■■□□□ 1.24
TSSC4-210ENST00000496468 SIL1Q9H173 461 aa22.79■■□□□ 1.24
TSSC4-210ENST00000496468 TMX4Q9H1E5 349 aaPredicted RBP22.79■■□□□ 1.24
TSSC4-210ENST00000496468 COPRSQ9NQ92 184 aa22.79■■□□□ 1.24
TSSC4-210ENST00000496468 ZNF219Q9P2Y4 722 aaPredicted RBP22.79■■□□□ 1.24
TSSC4-210ENST00000496468 LTBP1Q14766 1721 aa22.79■■□□□ 1.24
TSSC4-210ENST00000496468 ATP6V0A2Q9Y487 856 aa22.78■■□□□ 1.24
TSSC4-210ENST00000496468 GOLGB1Q14789 3259 aaKnown RBP22.77■■□□□ 1.24
TSSC4-210ENST00000496468 C21orf2O43822 256 aa22.77■■□□□ 1.24
TSSC4-210ENST00000496468 SOGA3Q5TF21 947 aa22.77■■□□□ 1.24
TSSC4-210ENST00000496468 SLC51AQ86UW1 340 aa22.77■■□□□ 1.24
TSSC4-210ENST00000496468 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
TSSC4-210ENST00000496468 FBXO3Q9UK99 471 aa22.77■■□□□ 1.24
TSSC4-210ENST00000496468 EYA2O00167 538 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms