RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SH3BP5LQ7L8J4 393 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 SIX5Q8N196 739 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 PMFBP1Q8TBY8 1022 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 PRR14Q9BWN1 585 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 STRN4Q9NRL3 753 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 DNAAF2Q9NVR5 837 aaKnown RBP6.27□□□□□ -1.41
VPS52-222ENST00000495981 SBNO1A3KN83 1393 aa6.27□□□□□ -1.41
VPS52-222ENST00000495981 CASZ1Q86V15 1759 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 KIAA1210Q9ULL0 1709 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 PLSCR1O15162 318 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 SLC15A2Q16348 729 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 EML3Q32P44 896 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 TNS4Q8IZW8 715 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 LARGE2Q8N3Y3 721 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 MRPL50Q8N5N7 158 aaKnown RBP6.26□□□□□ -1.41
VPS52-222ENST00000495981 NUDT12Q9BQG2 462 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 MTFR1LQ9H019 292 aa6.26□□□□□ -1.41
VPS52-222ENST00000495981 CXXC1Q9P0U4 656 aaPredicted RBP6.26□□□□□ -1.41
VPS52-222ENST00000495981 ANKRD33BA6NCL7 494 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 PRMT3O60678 531 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 NR1I2O75469 434 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 PSME1Q06323 249 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 PTCRAQ6ISU1 281 aaPredicted RBP6.25□□□□□ -1.41
VPS52-222ENST00000495981 STAC3Q96MF2 364 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 BCL2L13Q9BXK5 485 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 PCDHB3Q9Y5E6 796 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 MAP3K5Q99683 1374 aa6.25□□□□□ -1.41
VPS52-222ENST00000495981 KIAA0232Q92628 1395 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 SOWAHBA6NEL2 793 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 BCAMP50895 628 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 TAGLNQ01995 201 aaKnown RBP6.24□□□□□ -1.41
VPS52-222ENST00000495981 ZNF211Q13398 564 aaPredicted RBP6.24□□□□□ -1.41
VPS52-222ENST00000495981 TXNRD1Q16881 649 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 SH3RF1Q7Z6J0 888 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 FBXO33Q7Z6M2 555 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 TRIM50Q86XT4 487 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 ARMC2Q8NEN0 867 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 GIPC2Q8TF65 315 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 PRIMPOLQ96LW4 560 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 ARHGAP9Q9BRR9 750 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 PRDM11Q9NQV5 511 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 EGFL7Q9UHF1 273 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 HPS5Q9UPZ3 1129 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 NOD1Q9Y239 953 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 PCDHGA11Q9Y5H2 935 aa6.24□□□□□ -1.41
VPS52-222ENST00000495981 RGPD3A6NKT7 1758 aaPredicted RBP6.23□□□□□ -1.41
VPS52-222ENST00000495981 RGPD4Q7Z3J3 1758 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 ARHGEF10O15013 1369 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 ZC3H6P61129 1189 aaKnown RBP6.23□□□□□ -1.41
VPS52-222ENST00000495981 MMRN1Q13201 1228 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 ZNF827Q17R98 1081 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 ZNF592Q92610 1267 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 BIN2Q9UBW5 565 aaPredicted RBP6.23□□□□□ -1.41
VPS52-222ENST00000495981 DOLKQ9UPQ8 538 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 LRRC37A3O60309 1634 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 QRICH2Q9H0J4 1663 aa6.23□□□□□ -1.41
VPS52-222ENST00000495981 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 PARP4Q9UKK3 1724 aaKnown RBP6.22□□□□□ -1.41
VPS52-222ENST00000495981 ADCY9O60503 1353 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 RAB3GAP2Q9H2M9 1393 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 SFI1A8K8P3 1242 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 ICMTO60725 284 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 ATP1A2P50993 1020 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 SEC13P55735 322 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 PPP4CP60510 307 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 GTF2IP78347 998 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 CAPN12Q6ZSI9 719 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 TCP11L2Q8N4U5 519 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
VPS52-222ENST00000495981 PURBQ96QR8 312 aaKnown RBP6.22□□□□□ -1.41
VPS52-222ENST00000495981 MPHOSPH9Q99550 1183 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 SPSB2Q99619 263 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 UNC93B1Q9H1C4 597 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 ANO2Q9NQ90 1003 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 STK32BQ9NY57 414 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 SEPT3Q9UH03 358 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 PRR36Q9H6K5 1346 aa6.22□□□□□ -1.41
VPS52-222ENST00000495981 PIK3C2AO00443 1686 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 H3BRB1 525 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 LGR5O75473 907 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 NUTM2GQ5VZR2 741 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 JMYQ8N9B5 988 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 TUT1Q9H6E5 874 aaKnown RBP6.21□□□□□ -1.42
VPS52-222ENST00000495981 C14orf93Q9H972 538 aaKnown RBP6.21□□□□□ -1.42
VPS52-222ENST00000495981 TSR3Q9UJK0 312 aaKnown RBP6.21□□□□□ -1.42
VPS52-222ENST00000495981 CHD4Q14839 1912 aa6.21□□□□□ -1.42
VPS52-222ENST00000495981 EIF3AQ14152 1382 aaKnown RBP6.2□□□□□ -1.42
VPS52-222ENST00000495981 SSH2Q76I76 1423 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 ABL1P00519 1130 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 TCF3P15923 654 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 VAMP1P23763 118 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 ARHGAP4P98171 946 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 SAFB2Q14151 953 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS52-222ENST00000495981 ERFEQ4G0M1 354 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 OXLD1Q5BKU9 147 aa6.2□□□□□ -1.42
VPS52-222ENST00000495981 ANKK1Q8NFD2 765 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms