RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
CBX1-205ENST00000495350 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
CBX1-205ENST00000495350 RRP7AQ9Y3A4 280 aaKnown RBP8.19□□□□□ -1.1
CBX1-205ENST00000495350 UBN2Q6ZU65 1347 aa8.19□□□□□ -1.1
CBX1-205ENST00000495350 BBOX1O75936 387 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 NTSR2O95665 410 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 SLC10A3P09131 477 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 DPF2Q92785 391 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 PHACTR3Q96KR7 559 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 RTFDC1Q9BY42 306 aaPredicted RBP8.18□□□□□ -1.1
CBX1-205ENST00000495350 AKAP11Q9UKA4 1901 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 ABCC4O15439 1325 aa8.18□□□□□ -1.1
CBX1-205ENST00000495350 NEFMP07197 916 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 MYL6BP14649 208 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 RPS12P25398 132 aaKnown RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 TAF7Q15545 349 aaPredicted RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 RBM26Q5T8P6 1007 aaKnown RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 TTLL7Q6ZT98 887 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 DDX46Q7L014 1031 aaKnown RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 SP8Q8IXZ3 490 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 UTP14AQ9BVJ6 771 aaKnown RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 RSPH6AQ9H0K4 717 aa8.17□□□□□ -1.1
CBX1-205ENST00000495350 ZBTB12Q9Y330 459 aaPredicted RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
CBX1-205ENST00000495350 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 YDJCA8MPS7 323 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 PSMD14O00487 310 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 HTATSF1O43719 755 aaKnown RBP8.16□□□□□ -1.1
CBX1-205ENST00000495350 U2AF1L5P0DN76 240 aaPredicted RBP8.16□□□□□ -1.1
CBX1-205ENST00000495350 NUP98P52948 1817 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 U2AF1Q01081 240 aaKnown RBP eCLIP8.16□□□□□ -1.1
CBX1-205ENST00000495350 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 KIF4BQ2VIQ3 1234 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 GIGYF2Q6Y7W6 1299 aaKnown RBP8.16□□□□□ -1.1
CBX1-205ENST00000495350 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 ZNF34Q8IZ26 560 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
CBX1-205ENST00000495350 CSRNP1Q96S65 589 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 GGA3Q9NZ52 723 aa8.16□□□□□ -1.1
CBX1-205ENST00000495350 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 G3V3G9 751 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 GRAPQ13588 217 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 HABP4Q5JVS0 413 aaKnown RBP8.15□□□□□ -1.1
CBX1-205ENST00000495350 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 FBXO46Q6PJ61 603 aaPredicted RBP8.15□□□□□ -1.1
CBX1-205ENST00000495350 RASAL3Q86YV0 1011 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 GRAPLQ8TC17 118 aaPredicted RBP8.15□□□□□ -1.1
CBX1-205ENST00000495350 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
CBX1-205ENST00000495350 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 C6orf229H3BNL8 230 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 FKBP1BP68106 108 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 HSP90AB3PQ58FF7 597 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 ZNF296Q8WUU4 475 aaPredicted RBP8.14□□□□□ -1.11
CBX1-205ENST00000495350 CDCA5Q96FF9 252 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 EYA3Q99504 573 aa8.14□□□□□ -1.11
CBX1-205ENST00000495350 RIMBP2O15034 1052 aa8.13□□□□□ -1.11
CBX1-205ENST00000495350 ECE2O60344 883 aa8.13□□□□□ -1.11
CBX1-205ENST00000495350 TBC1D8O95759 1140 aa8.13□□□□□ -1.11
CBX1-205ENST00000495350 EGFRP00533 1210 aa8.13□□□□□ -1.11
CBX1-205ENST00000495350 HCLS1P14317 486 aaPredicted RBP8.13□□□□□ -1.11
CBX1-205ENST00000495350 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
CBX1-205ENST00000495350 SLC10A5Q5PT55 438 aa8.13□□□□□ -1.11
CBX1-205ENST00000495350 TRMT112Q9UI30 125 aaKnown RBP8.13□□□□□ -1.11
CBX1-205ENST00000495350 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
CBX1-205ENST00000495350 SH3TC1Q8TE82 1336 aa8.12□□□□□ -1.11
CBX1-205ENST00000495350 GPR25O00155 361 aa8.12□□□□□ -1.11
CBX1-205ENST00000495350 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
CBX1-205ENST00000495350 NF2P35240 595 aa8.12□□□□□ -1.11
CBX1-205ENST00000495350 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
CBX1-205ENST00000495350 SREBF2Q12772 1141 aa8.12□□□□□ -1.11
CBX1-205ENST00000495350 FKTNO75072 461 aa8.11□□□□□ -1.11
CBX1-205ENST00000495350 TCIRG1Q13488 830 aa8.11□□□□□ -1.11
CBX1-205ENST00000495350 NOM1Q5C9Z4 860 aaKnown RBP8.11□□□□□ -1.11
CBX1-205ENST00000495350 ANGEL2Q5VTE6 544 aaKnown RBP8.11□□□□□ -1.11
CBX1-205ENST00000495350 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
CBX1-205ENST00000495350 PAPPA2Q9BXP8 1791 aa8.11□□□□□ -1.11
CBX1-205ENST00000495350 POLR2AP24928 1970 aaKnown RBP8.11□□□□□ -1.11
CBX1-205ENST00000495350 PITPNM2Q9BZ72 1349 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
CBX1-205ENST00000495350 MKRN3Q13064 507 aaKnown RBP8.1□□□□□ -1.11
CBX1-205ENST00000495350 SCARF1Q14162 830 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 DOK7Q18PE1 504 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 THUMPD2Q9BTF0 503 aaKnown RBP8.1□□□□□ -1.11
CBX1-205ENST00000495350 PCGF6Q9BYE7 350 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 ZC3H12CQ9C0D7 883 aaKnown RBP8.1□□□□□ -1.11
CBX1-205ENST00000495350 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
CBX1-205ENST00000495350 UBE2Q2LH0YL09 131 aa8.09□□□□□ -1.11
CBX1-205ENST00000495350 ALDH1A1P00352 501 aa8.09□□□□□ -1.11
CBX1-205ENST00000495350 VIL1P09327 827 aaKnown RBP8.09□□□□□ -1.11
CBX1-205ENST00000495350 TM4SF4P48230 202 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms