RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 TIAM2Q8IVF5 1701 aa7.58□□□□□ -1.2
RTN4IP1-202ENST00000493619 CAMTA2O94983 1202 aa7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 SRGNP10124 158 aa7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 PRR5LQ6MZQ0 368 aa7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 PPP1R42Q7Z4L9 355 aa7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 NBPF5PQ86XG9 351 aaPredicted RBP7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
RTN4IP1-202ENST00000493619 MYBBP1AQ9BQG0 1328 aaKnown RBP7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 PNMA8AQ86V59 439 aaPredicted RBP7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 SUPT20HQ8NEM7 779 aa7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 ZC3H15Q8WU90 426 aaKnown RBP7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 PSMD1Q99460 953 aa7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 BCL2L12Q9HB09 334 aa7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 SLC24A3Q9HC58 644 aa7.56□□□□□ -1.2
RTN4IP1-202ENST00000493619 MAP3K15Q6ZN16 1313 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 FKBP4Q02790 459 aaKnown RBP eCLIP7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 TBC1D9BQ66K14 1250 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 JMYQ8N9B5 988 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 ZNF622Q969S3 477 aaKnown RBP eCLIP7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 RNF166Q96A37 237 aaPredicted RBP7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
RTN4IP1-202ENST00000493619 DLG5Q8TDM6 1919 aa7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 WDR43Q15061 677 aaKnown RBP eCLIP7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 PHACTR3Q96KR7 559 aa7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 CRAMP1Q96RY5 1269 aa7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
RTN4IP1-202ENST00000493619 COL11A2P13942 1736 aaPredicted RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 A1BGP04217 495 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 CHRNA5P30532 468 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 ZEB1P37275 1124 aaPredicted RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 MMP14P50281 582 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 EIF4A1P60842 406 aaKnown RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 GIGYF2Q6Y7W6 1299 aaKnown RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 LDHDQ86WU2 507 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 NGEFQ8N5V2 710 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 ZNF526Q8TF50 670 aaPredicted RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 JDP2Q8WYK2 163 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 KLRG1Q96E93 195 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 RBM17Q96I25 401 aaKnown RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 TBC1D2BQ9UPU7 963 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 ZNF330Q9Y3S2 320 aaPredicted RBP7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
RTN4IP1-202ENST00000493619 NFKBIEO00221 500 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 BBOX1O75936 387 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 GPC2Q8N158 579 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 RPGRQ92834 1020 aaKnown RBP7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 MFRPQ9BY79 579 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 TSPYL4Q9UJ04 414 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 NUP98P52948 1817 aa7.52□□□□□ -1.21
RTN4IP1-202ENST00000493619 ANKRD36CQ5JPF3 1778 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 CEP350Q5VT06 3117 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 EIF6P56537 245 aaKnown RBP7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 SLC10A5Q5PT55 438 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 MCM10Q7L590 875 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 NMRK2Q9NPI5 230 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 CCDC88AQ3V6T2 1871 aa7.51□□□□□ -1.21
RTN4IP1-202ENST00000493619 ZNF316A6NFI3 1004 aaPredicted RBP7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 C21orf2O43822 256 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 RIPK4P57078 832 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 SMIM5Q71RC9 77 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 HYPKQ9NX55 129 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 DBF4Q9UBU7 674 aaPredicted RBP7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 HACL1Q9UJ83 578 aa7.5□□□□□ -1.21
RTN4IP1-202ENST00000493619 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 FZD9O00144 591 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 TMPOP42166 694 aaKnown RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 TRIM28Q13263 835 aaKnown RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 USP50Q70EL3 339 aaPredicted RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 DNAJC5GQ8N7S2 189 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 UTP14AQ9BVJ6 771 aaKnown RBP7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 SH3TC1Q8TE82 1336 aa7.49□□□□□ -1.21
RTN4IP1-202ENST00000493619 SLX4Q8IY92 1834 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 C2orf72A6NCS6 295 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 CHL1O00533 1208 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 CA12O43570 354 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 GNAI1P63096 354 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 RASSF7Q02833 373 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms