RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 ECHDC1Q9NTX5 307 aa16.32■□□□□ 0.2
TFE3-204ENST00000493583 SPATA31D1Q6ZQQ2 1576 aa16.32■□□□□ 0.2
TFE3-204ENST00000493583 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
TFE3-204ENST00000493583 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
TFE3-204ENST00000493583 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
TFE3-204ENST00000493583 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
TFE3-204ENST00000493583 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
TFE3-204ENST00000493583 GCP02774 474 aa16.31■□□□□ 0.2
TFE3-204ENST00000493583 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
TFE3-204ENST00000493583 ZNF215Q9UL58 517 aaPredicted RBP16.31■□□□□ 0.2
TFE3-204ENST00000493583 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
TFE3-204ENST00000493583 BECN2A8MW95 431 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 LRRN4CLQ8ND94 238 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
TFE3-204ENST00000493583 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
TFE3-204ENST00000493583 GOLGA6L19H0YKK7 550 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
TFE3-204ENST00000493583 SPTLC3Q9NUV7 552 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 ELF2Q15723 593 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 KIF24Q5T7B8 1368 aa16.3■□□□□ 0.2
TFE3-204ENST00000493583 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
TFE3-204ENST00000493583 NRXN3Q9Y4C0 1643 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
TFE3-204ENST00000493583 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
TFE3-204ENST00000493583 ZNF75DP51815 510 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.2
TFE3-204ENST00000493583 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
TFE3-204ENST00000493583 SBNO1A3KN83 1393 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 SASH1O94885 1247 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 CDC42BPGQ6DT37 1551 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 RUFY2Q8WXA3 655 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
TFE3-204ENST00000493583 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
TFE3-204ENST00000493583 SKILP12757 684 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 NECTIN1Q15223 517 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 VPS53Q5VIR6 699 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 Q6ZUG5 572 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
TFE3-204ENST00000493583 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.2
TFE3-204ENST00000493583 ME1P48163 572 aa16.27■□□□□ 0.19
TFE3-204ENST00000493583 APOBRQ0VD83 1088 aa16.27■□□□□ 0.19
TFE3-204ENST00000493583 CEP135Q66GS9 1140 aa16.27■□□□□ 0.19
TFE3-204ENST00000493583 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
TFE3-204ENST00000493583 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 HAND2P61296 217 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 TMEM87AQ8NBN3 555 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 TTC21AQ8NDW8 1320 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
TFE3-204ENST00000493583 AOPEPQ8N6M6 819 aa16.26■□□□□ 0.19
TFE3-204ENST00000493583 EPHA10Q5JZY3 1008 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 TMEM51Q9NW97 253 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 SMC2O95347 1197 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
TFE3-204ENST00000493583 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 POLA2Q14181 598 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
TFE3-204ENST00000493583 EIF4A1P60842 406 aaKnown RBP16.24■□□□□ 0.19
TFE3-204ENST00000493583 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
TFE3-204ENST00000493583 GOLGB1Q14789 3259 aaKnown RBP16.24■□□□□ 0.19
TFE3-204ENST00000493583 REREQ9P2R6 1566 aa16.24■□□□□ 0.19
TFE3-204ENST00000493583 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
TFE3-204ENST00000493583 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
TFE3-204ENST00000493583 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
TFE3-204ENST00000493583 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
TFE3-204ENST00000493583 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 KMT5BQ4FZB7 885 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 IP6K1Q92551 441 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
TFE3-204ENST00000493583 USP28Q96RU2 1077 aa16.22■□□□□ 0.19
TFE3-204ENST00000493583 RXRAP19793 462 aa16.22■□□□□ 0.19
TFE3-204ENST00000493583 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
TFE3-204ENST00000493583 TTLL5Q6EMB2 1281 aa16.22■□□□□ 0.19
TFE3-204ENST00000493583 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
TFE3-204ENST00000493583 GTPBP4Q9BZE4 634 aaKnown RBP16.22■□□□□ 0.19
TFE3-204ENST00000493583 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
TFE3-204ENST00000493583 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 MYD88Q99836 296 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 KIF20AO95235 890 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 RPS6KB1P23443 525 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 SYT10Q6XYQ8 523 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 KAZALD1Q96I82 304 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
TFE3-204ENST00000493583 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
TFE3-204ENST00000493583 SCRN1Q12765 414 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms