RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 NDUFB9Q9Y6M9 179 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 COL15A1P39059 1388 aa5.41□□□□□ -1.54
TRA2B-215ENST00000492417 SNAP23O00161 211 aa5.4□□□□□ -1.54
TRA2B-215ENST00000492417 DHX16O60231 1041 aaKnown RBP5.4□□□□□ -1.54
TRA2B-215ENST00000492417 PDE6BP35913 854 aa5.4□□□□□ -1.54
TRA2B-215ENST00000492417 TTLL12Q14166 644 aaPredicted RBP5.4□□□□□ -1.54
TRA2B-215ENST00000492417 DOK7Q18PE1 504 aa5.4□□□□□ -1.54
TRA2B-215ENST00000492417 BEND3Q5T5X7 828 aa5.4□□□□□ -1.54
TRA2B-215ENST00000492417 IPO9Q96P70 1041 aaKnown RBP5.4□□□□□ -1.54
TRA2B-215ENST00000492417 IFT172Q9UG01 1749 aa5.4□□□□□ -1.54
TRA2B-215ENST00000492417 A0A0G2JLW4 131 aa5.4□□□□□ -1.55
TRA2B-215ENST00000492417 ZBTB7BO15156 539 aaPredicted RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 MX1P20591 662 aa5.4□□□□□ -1.55
TRA2B-215ENST00000492417 CEP85Q6P2H3 762 aa5.4□□□□□ -1.55
TRA2B-215ENST00000492417 COL23A1Q86Y22 540 aaPredicted RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 ZBTB38Q8NAP3 1195 aaPredicted RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 GPR101Q96P66 508 aaPredicted RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 XRN1Q8IZH2 1706 aaKnown RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 PPIP5K2O43314 1243 aa5.4□□□□□ -1.55
TRA2B-215ENST00000492417 C21orf2O43822 256 aa5.4□□□□□ -1.55
TRA2B-215ENST00000492417 NKX1-1Q15270 411 aaPredicted RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 PUS3Q9BZE2 481 aaKnown RBP5.4□□□□□ -1.55
TRA2B-215ENST00000492417 IL15P40933 162 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-215ENST00000492417 CTSWP56202 376 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 LRRC24Q50LG9 513 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 MPNDQ8N594 471 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ANKRD44Q8N8A2 993 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.39□□□□□ -1.555e-7■□□□□ 10.3
TRA2B-215ENST00000492417 LRRC4BQ9NT99 713 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 TMOD2Q9NZR1 351 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ERBB4Q15303 1308 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 MINDY4BA8MYZ0 360 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ALDH1B1P30837 517 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 TRDNQ13061 729 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 INTS3Q68E01 1043 aaKnown RBP5.39□□□□□ -1.55
TRA2B-215ENST00000492417 VEZTQ9HBM0 779 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 GGA1Q9UJY5 639 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 SOS1Q07889 1333 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF521Q96K83 1311 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 FMN2Q9NZ56 1722 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 EYA2O00167 538 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 RAB11FIP3O75154 756 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 PCCAP05165 728 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-215ENST00000492417 USP5P45974 858 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 EIF5P55010 431 aaKnown RBP5.39□□□□□ -1.55
TRA2B-215ENST00000492417 AAMPQ13685 434 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 OGFOD1Q8N543 542 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 AIDAQ96BJ3 306 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ZBTB40Q9NUA8 1239 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 STRCQ7RTU9 1775 aa5.39□□□□□ -1.55
TRA2B-215ENST00000492417 ECM2O94769 699 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 IGKV5-2P06315 115 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 SSFA2P28290 1259 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 TDO2P48775 406 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 SLC4A9Q96Q91 983 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 A0A1B0GUL7 405 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 ZKSCAN1P17029 563 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 PDE4AP27815 886 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 GYG1P46976 350 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 FOXD4L5Q5VV16 416 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 FOXD4L4Q8WXT5 416 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF408Q9H9D4 720 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 MED1Q15648 1581 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 KIF1AQ12756 1690 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 ERVV-1B6SEH8 477 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 GLRX3O76003 335 aaKnown RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 MAP3K12Q12852 859 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 PICALMQ13492 652 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 NFXL1Q6ZNB6 911 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 RALYLQ86SE5 291 aaKnown RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 CNKSR1Q969H4 720 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 ECHDC1Q9NTX5 307 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 KDM6AO15550 1401 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 FOSBP53539 338 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 GNL2Q13823 731 aaKnown RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 PRKG1Q13976 671 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 EAPPQ56P03 285 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 INTS5Q6P9B9 1019 aaKnown RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF804AQ7Z570 1209 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 HSCBQ8IWL3 235 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 MIGA1Q8NAN2 632 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 OTUD7AQ8TE49 926 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 PKNOX2Q96KN3 472 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 EYA3Q99504 573 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 DBNDD1Q9H9R9 158 aa5.38□□□□□ -1.55
TRA2B-215ENST00000492417 CTDP1Q9Y5B0 961 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-215ENST00000492417 NCAPD2Q15021 1401 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CDC45O75419 566 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 REC8O95072 547 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 POLR3DP05423 398 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 GTF2IP78347 998 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF827Q17R98 1081 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 TBC1D9Q6ZT07 1266 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 TTLL6Q8N841 843 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 SLKQ9H2G2 1235 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 MPHOSPH10O00566 681 aaKnown RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CYP7A1P22680 504 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms