RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 CCDC144CPQ8IYA2 1237 aa17.99■□□□□ 0.47
TNFRSF1B-203ENST00000492361 SDF4Q9BRK5 362 aa17.98■□□□□ 0.47
TNFRSF1B-203ENST00000492361 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
TNFRSF1B-203ENST00000492361 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 IGSF3O75054 1194 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 GCKRQ14397 625 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 RXRAP19793 462 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 PDCP20941 246 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 EVA1CP58658 441 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 LRMPQ12912 555 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TTLL5Q6EMB2 1281 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TTC14Q96N46 770 aa17.97■□□□□ 0.47
TNFRSF1B-203ENST00000492361 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 NEURL1BA8MQ27 555 aa17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 TRMT1Q9NXH9 659 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 CPLX1O14810 134 aa17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 CBX1P83916 185 aa17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 ZBTB9Q96C00 473 aa17.96■□□□□ 0.47
TNFRSF1B-203ENST00000492361 GOLGA6L6A8MZA4 724 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TTLL7Q6ZT98 887 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 NRBP1Q9UHY1 535 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 KDRP35968 1356 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TYRO3Q06418 890 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 RPAP1Q9BWH6 1393 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 HIP1O00291 1037 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 ZSWIM6Q9HCJ5 1215 aa17.95■□□□□ 0.46
TNFRSF1B-203ENST00000492361 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 HSP90AA4PQ58FG1 418 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 KAZALD1Q96I82 304 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 NR1I2O75469 434 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 ZNF165P49910 485 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 ARHGEF25Q86VW2 580 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 PYCARDQ9ULZ3 195 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TNNI3KQ59H18 835 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 FPGT-TNNI3KV9GXZ4 949 aa17.94■□□□□ 0.46
TNFRSF1B-203ENST00000492361 CCDC73Q6ZRK6 1079 aa17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 GJB4Q9NTQ9 266 aa17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 V9GYY5 206 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 NECTIN1Q15223 517 aa17.93■□□□□ 0.46
TNFRSF1B-203ENST00000492361 LRRC24Q50LG9 513 aa17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 RRP12Q5JTH9 1297 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 IFNL2Q8IZJ0 200 aa17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 PUS3Q9BZE2 481 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 HSPA2P54652 639 aa17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 PDLIM2Q96JY6 352 aa17.92■□□□□ 0.46
TNFRSF1B-203ENST00000492361 ANKRD1Q15327 319 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 PI16Q6UXB8 463 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 LETM1O95202 739 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TTC39AQ5SRH9 613 aa17.91■□□□□ 0.46
TNFRSF1B-203ENST00000492361 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 CEP126Q9P2H0 1117 aa17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 AOX1Q06278 1338 aa17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 CYP21A2P08686 494 aa17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
TNFRSF1B-203ENST00000492361 TAF5LO75529 589 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PTPN21Q16825 1174 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 LEO1Q8WVC0 666 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PDCL3Q9H2J4 239 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 AP5Z1O43299 807 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 MCMDC2Q4G0Z9 681 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SMC2O95347 1197 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SCAND2PQ9GZW5 306 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CBX8Q9HC52 389 aa17.89■□□□□ 0.45
TNFRSF1B-203ENST00000492361 STK38Q15208 465 aa17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 FSIP1Q8NA03 581 aa17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ZNF500O60304 480 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1B-203ENST00000492361 NRKQ7Z2Y5 1582 aa17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 A0A1B0GVL5 298 aa17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 FAM177A1Q8N128 213 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 NPHP3Q7Z494 1330 aa17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms