RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CC2D1BQ5T0F9 858 aaKnown RBP15.75■□□□□ 0.11
CACNA1C-228ENST00000492150 DPF2Q92785 391 aa15.75■□□□□ 0.11
CACNA1C-228ENST00000492150 COL3A1P02461 1466 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-228ENST00000492150 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 OTOP1Q7RTM1 612 aa15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 TRIM17Q9Y577 477 aa15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-228ENST00000492150 KCNQ3O43525 872 aa15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 RTFDC1Q9BY42 306 aaPredicted RBP15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 LAMA3Q16787 3333 aa15.73■□□□□ 0.11
CACNA1C-228ENST00000492150 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
CACNA1C-228ENST00000492150 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
CACNA1C-228ENST00000492150 U2SURPO15042 1029 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-228ENST00000492150 TMEM106CQ9BVX2 250 aa15.72■□□□□ 0.11
CACNA1C-228ENST00000492150 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
CACNA1C-228ENST00000492150 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
CACNA1C-228ENST00000492150 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.11
CACNA1C-228ENST00000492150 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.11
CACNA1C-228ENST00000492150 NIP7Q9Y221 180 aaKnown RBP eCLIP15.71■□□□□ 0.11
CACNA1C-228ENST00000492150 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.11
CACNA1C-228ENST00000492150 RAD17O75943 681 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 SREBF2Q12772 1141 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 SAMD7Q7Z3H4 446 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 SULF1Q8IWU6 871 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 RPGRQ92834 1020 aaKnown RBP15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 CDCA5Q96FF9 252 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 ABCC12Q96J65 1359 aa15.7■□□□□ 0.1
CACNA1C-228ENST00000492150 ZNF609O15014 1411 aa15.69■□□□□ 0.1
CACNA1C-228ENST00000492150 PIP4K2AP48426 406 aaPredicted RBP15.69■□□□□ 0.1
CACNA1C-228ENST00000492150 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
CACNA1C-228ENST00000492150 STXBP5LQ9Y2K9 1186 aa15.69■□□□□ 0.1
CACNA1C-228ENST00000492150 LAMB1P07942 1786 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 ALDH1A1P00352 501 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 ANKRD13DQ6ZTN6 518 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 ZNF333Q96JL9 665 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 R3HDMLQ9H3Y0 253 aa15.68■□□□□ 0.1
CACNA1C-228ENST00000492150 EGFRP00533 1210 aa15.67■□□□□ 0.1
CACNA1C-228ENST00000492150 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
CACNA1C-228ENST00000492150 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
CACNA1C-228ENST00000492150 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
CACNA1C-228ENST00000492150 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
CACNA1C-228ENST00000492150 YDJCA8MPS7 323 aa15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 RPS12P25398 132 aaKnown RBP15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 SLC51AQ86UW1 340 aa15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 ERO1AQ96HE7 468 aa15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 RBM17Q96I25 401 aaKnown RBP15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
CACNA1C-228ENST00000492150 IBTKQ9P2D0 1353 aaPredicted RBP15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 VCANP13611 3396 aa15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 SOX1O00570 391 aaPredicted RBP15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 GGA3Q9NZ52 723 aa15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
CACNA1C-228ENST00000492150 NBPF26B4DH59 902 aa15.64■□□□□ 0.09
CACNA1C-228ENST00000492150 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.09
CACNA1C-228ENST00000492150 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
CACNA1C-228ENST00000492150 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.09
CACNA1C-228ENST00000492150 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
CACNA1C-228ENST00000492150 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
CACNA1C-228ENST00000492150 FAM177BA6PVY3 158 aa15.63■□□□□ 0.09
CACNA1C-228ENST00000492150 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
CACNA1C-228ENST00000492150 KIF4BQ2VIQ3 1234 aa15.63■□□□□ 0.09
CACNA1C-228ENST00000492150 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.63■□□□□ 0.09
CACNA1C-228ENST00000492150 NUP98P52948 1817 aa15.62■□□□□ 0.09
CACNA1C-228ENST00000492150 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
CACNA1C-228ENST00000492150 SPTBN5Q9NRC6 3674 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-228ENST00000492150 PSMD14O00487 310 aa15.61■□□□□ 0.09
CACNA1C-228ENST00000492150 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
CACNA1C-228ENST00000492150 MCM10Q7L590 875 aa15.61■□□□□ 0.09
CACNA1C-228ENST00000492150 NUTM1Q86Y26 1132 aa15.61■□□□□ 0.09
CACNA1C-228ENST00000492150 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
CACNA1C-228ENST00000492150 TCERG1O14776 1098 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 HLFQ16534 295 aa15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 SLC4A8Q2Y0W8 1093 aa15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 DPF3Q92784 378 aa15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 EFCC1Q9HA90 598 aa15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 DUOX1Q9NRD9 1551 aa15.6■□□□□ 0.09
CACNA1C-228ENST00000492150 INHBEP58166 350 aa15.59■□□□□ 0.09
CACNA1C-228ENST00000492150 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
CACNA1C-228ENST00000492150 MPNDQ8N594 471 aa15.59■□□□□ 0.09
CACNA1C-228ENST00000492150 UBE2Q2LH0YL09 131 aa15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 COL9A1P20849 921 aa15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 MOB2Q70IA6 237 aa15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 SP8Q8IXZ3 490 aa15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 DEFB123Q8N688 67 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms