RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
NCSTN-213ENST00000491332 CPNE3O75131 537 aaKnown RBP9.3□□□□□ -0.92
NCSTN-213ENST00000491332 SASH3O75995 380 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 CD33P20138 364 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 FGD1P98174 961 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 USPL1Q5W0Q7 1092 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 SLC30A3Q99726 388 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 DUSP9Q99956 384 aaKnown RBP9.3□□□□□ -0.92
NCSTN-213ENST00000491332 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 RNF19AQ9NV58 838 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 CNTN3Q9P232 1028 aa9.3□□□□□ -0.92
NCSTN-213ENST00000491332 CDC14CA4D256 554 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 GPR25O00155 361 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 PHACTR2O75167 634 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 ALG1LQ6GMV1 187 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 VWA5B2Q8N398 1253 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 NANOS1Q8WY41 292 aaKnown RBP9.29□□□□□ -0.92
NCSTN-213ENST00000491332 ABI2Q9NYB9 513 aaPredicted RBP9.29□□□□□ -0.92
NCSTN-213ENST00000491332 ZFATQ9P243 1243 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
NCSTN-213ENST00000491332 FGFR3P22607 806 aa9.28□□□□□ -0.92
NCSTN-213ENST00000491332 TARSP26639 723 aaKnown RBP9.28□□□□□ -0.92
NCSTN-213ENST00000491332 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
NCSTN-213ENST00000491332 C1orf127Q8N9H9 656 aa9.28□□□□□ -0.92
NCSTN-213ENST00000491332 FBF1Q8TES7 1133 aa9.28□□□□□ -0.92
NCSTN-213ENST00000491332 PHF24Q9UPV7 400 aa9.28□□□□□ -0.92
NCSTN-213ENST00000491332 VAMP1P23763 118 aa9.27□□□□□ -0.93
NCSTN-213ENST00000491332 FAM182BQ5T319 152 aa9.27□□□□□ -0.93
NCSTN-213ENST00000491332 SV2AQ7L0J3 742 aa9.27□□□□□ -0.93
NCSTN-213ENST00000491332 RAB44Q7Z6P3 723 aaPredicted RBP9.27□□□□□ -0.93
NCSTN-213ENST00000491332 EREGO14944 169 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 MMP20O60882 483 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 CYP2E1P05181 493 aaPredicted RBP9.26□□□□□ -0.93
NCSTN-213ENST00000491332 RARAP10276 462 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 NFKB1P19838 968 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 DAB2P98082 770 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 MRPL58Q14197 206 aaKnown RBP9.26□□□□□ -0.93
NCSTN-213ENST00000491332 TTC39BQ5VTQ0 682 aaPredicted RBP9.26□□□□□ -0.93
NCSTN-213ENST00000491332 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 CCDC74AQ96AQ1 378 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 FAM161BQ96MY7 647 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
NCSTN-213ENST00000491332 POLR3DP05423 398 aaPredicted RBP9.25□□□□□ -0.93
NCSTN-213ENST00000491332 CTBSQ01459 385 aa9.25□□□□□ -0.93
NCSTN-213ENST00000491332 XPCQ01831 940 aaPredicted RBP9.25□□□□□ -0.93
NCSTN-213ENST00000491332 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
NCSTN-213ENST00000491332 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
NCSTN-213ENST00000491332 PNMA5Q96PV4 448 aa9.25□□□□□ -0.93
NCSTN-213ENST00000491332 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
NCSTN-213ENST00000491332 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.25□□□□□ -0.93
NCSTN-213ENST00000491332 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.25□□□□□ -0.93
NCSTN-213ENST00000491332 IRS1P35568 1242 aa9.24□□□□□ -0.93
NCSTN-213ENST00000491332 VEGFBP49765 207 aa9.24□□□□□ -0.93
NCSTN-213ENST00000491332 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
NCSTN-213ENST00000491332 BHMTQ93088 406 aa9.24□□□□□ -0.93
NCSTN-213ENST00000491332 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
NCSTN-213ENST00000491332 MAP3K6O95382 1288 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 RECKO95980 971 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 GNA15P30679 374 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 PI16Q6UXB8 463 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
NCSTN-213ENST00000491332 PMEPA1Q969W9 287 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 NPHS2Q9NP85 383 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 IGSF5Q9NSI5 407 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 TLR7Q9NYK1 1049 aaKnown RBP9.23□□□□□ -0.93
NCSTN-213ENST00000491332 KANSL3Q9P2N6 904 aa9.23□□□□□ -0.93
NCSTN-213ENST00000491332 CES1P23141 567 aa9.22□□□□□ -0.93
NCSTN-213ENST00000491332 PSMD2Q13200 908 aa9.22□□□□□ -0.93
NCSTN-213ENST00000491332 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
NCSTN-213ENST00000491332 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
NCSTN-213ENST00000491332 H3BM21 787 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 C2CD2LO14523 706 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
NCSTN-213ENST00000491332 SOX18P35713 384 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 GAS6Q14393 721 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 FRMD6Q96NE9 622 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 SALL4Q9UJQ4 1053 aa9.21□□□□□ -0.94
NCSTN-213ENST00000491332 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 SORBS3O60504 671 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 PSAPP07602 524 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 COL13A1Q5TAT6 717 aaPredicted RBP9.2□□□□□ -0.94
NCSTN-213ENST00000491332 DHX32Q7L7V1 743 aaKnown RBP9.2□□□□□ -0.94
NCSTN-213ENST00000491332 NPAS3Q8IXF0 933 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
NCSTN-213ENST00000491332 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
NCSTN-213ENST00000491332 KIF4AO95239 1232 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 PLAURQ03405 335 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 NEUROD1Q13562 356 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 LATS2Q9NRM7 1088 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 NLRP2Q9NX02 1062 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 AK5Q9Y6K8 562 aa9.19□□□□□ -0.94
NCSTN-213ENST00000491332 BMP4P12644 408 aa9.18□□□□□ -0.94
NCSTN-213ENST00000491332 TSNAXIP1Q2TAA8 658 aa9.18□□□□□ -0.94
NCSTN-213ENST00000491332 ZNF468Q5VIY5 522 aaPredicted RBP9.18□□□□□ -0.94
NCSTN-213ENST00000491332 PEAR1Q5VY43 1037 aaPredicted RBP9.18□□□□□ -0.94
NCSTN-213ENST00000491332 SYT9Q86SS6 491 aa9.18□□□□□ -0.94
NCSTN-213ENST00000491332 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms