RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 HOXA10P31260 410 aaPredicted RBP11.19□□□□□ -0.62
HPS4-215ENST00000491142 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
HPS4-215ENST00000491142 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
HPS4-215ENST00000491142 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
HPS4-215ENST00000491142 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
HPS4-215ENST00000491142 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
HPS4-215ENST00000491142 CELF2O95319 508 aaKnown RBP11.18□□□□□ -0.62
HPS4-215ENST00000491142 GPTP24298 496 aa11.18□□□□□ -0.62
HPS4-215ENST00000491142 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
HPS4-215ENST00000491142 NIM1KQ8IY84 436 aa11.18□□□□□ -0.62
HPS4-215ENST00000491142 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
HPS4-215ENST00000491142 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
HPS4-215ENST00000491142 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
HPS4-215ENST00000491142 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 ERVV-1B6SEH8 477 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
HPS4-215ENST00000491142 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 CXCL9Q07325 125 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 WDR43Q15061 677 aaKnown RBP eCLIP11.17□□□□□ -0.62
HPS4-215ENST00000491142 AOC3Q16853 763 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 TTLL7Q6ZT98 887 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 RBM17Q96I25 401 aaKnown RBP11.17□□□□□ -0.62
HPS4-215ENST00000491142 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
HPS4-215ENST00000491142 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 CA12O43570 354 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 DGKZQ13574 1117 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
HPS4-215ENST00000491142 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 ZNF408Q9H9D4 720 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
HPS4-215ENST00000491142 TRPM7Q96QT4 1865 aa11.16□□□□□ -0.62
HPS4-215ENST00000491142 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
HPS4-215ENST00000491142 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
HPS4-215ENST00000491142 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
HPS4-215ENST00000491142 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
HPS4-215ENST00000491142 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
HPS4-215ENST00000491142 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
HPS4-215ENST00000491142 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.62
HPS4-215ENST00000491142 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
HPS4-215ENST00000491142 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
HPS4-215ENST00000491142 CASP8AP2Q9UKL3 1982 aa11.15□□□□□ -0.62
HPS4-215ENST00000491142 RIC1Q4ADV7 1423 aa11.15□□□□□ -0.62
HPS4-215ENST00000491142 NTSR2O95665 410 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 MYL6BP14649 208 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 DLK2Q6UY11 383 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 KIF6Q6ZMV9 814 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 ZNF34Q8IZ26 560 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 ZNRF3Q9ULT6 936 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
HPS4-215ENST00000491142 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
HPS4-215ENST00000491142 RAD17O75943 681 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 TRPM4Q8TD43 1214 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 VPS33BQ9H267 617 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 NUP98P52948 1817 aa11.13□□□□□ -0.63
HPS4-215ENST00000491142 IBTKQ9P2D0 1353 aaPredicted RBP11.13□□□□□ -0.63
HPS4-215ENST00000491142 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
HPS4-215ENST00000491142 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
HPS4-215ENST00000491142 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
HPS4-215ENST00000491142 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
HPS4-215ENST00000491142 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
HPS4-215ENST00000491142 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
HPS4-215ENST00000491142 RTFDC1Q9BY42 306 aaPredicted RBP11.12□□□□□ -0.63
HPS4-215ENST00000491142 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
HPS4-215ENST00000491142 ABCC4O15439 1325 aa11.11□□□□□ -0.63
HPS4-215ENST00000491142 RRP1P56182 461 aaKnown RBP11.11□□□□□ -0.63
HPS4-215ENST00000491142 HUNKP57058 714 aa11.11□□□□□ -0.63
HPS4-215ENST00000491142 NOGQ13253 232 aa11.11□□□□□ -0.63
HPS4-215ENST00000491142 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
HPS4-215ENST00000491142 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
HPS4-215ENST00000491142 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
HPS4-215ENST00000491142 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
HPS4-215ENST00000491142 RCAN3Q9UKA8 241 aa11.11□□□□□ -0.63
HPS4-215ENST00000491142 YDJCA8MPS7 323 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 SOX10P56693 466 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 SLC10A5Q5PT55 438 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 PPP1R42Q7Z4L9 355 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 MPNDQ8N594 471 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
HPS4-215ENST00000491142 LAMB4A4D0S4 1761 aa11.1□□□□□ -0.63
HPS4-215ENST00000491142 FAM155AB1AL88 458 aaPredicted RBP11.09□□□□□ -0.63
HPS4-215ENST00000491142 BBOX1O75936 387 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 TNIP1Q15025 636 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
HPS4-215ENST00000491142 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
HPS4-215ENST00000491142 H7C1D1 291 aa11.08□□□□□ -0.64
HPS4-215ENST00000491142 HCLS1P14317 486 aaPredicted RBP11.08□□□□□ -0.64
HPS4-215ENST00000491142 KIF23Q02241 960 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms