RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
VPS72-205ENST00000491094 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
VPS72-205ENST00000491094 TFCP2Q12800 502 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
VPS72-205ENST00000491094 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
VPS72-205ENST00000491094 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
VPS72-205ENST00000491094 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 ME1P48163 572 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
VPS72-205ENST00000491094 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
VPS72-205ENST00000491094 PEAK1Q9H792 1746 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 HIP1O00291 1037 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 GOLIM4O00461 696 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 TIMM10P62072 90 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
VPS72-205ENST00000491094 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 GCP02774 474 aa13.15□□□□□ -0.3
VPS72-205ENST00000491094 BIN1O00499 593 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
VPS72-205ENST00000491094 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 A0A087WZG4 1122 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 HAND2P61296 217 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
VPS72-205ENST00000491094 TAF5LO75529 589 aa13.14□□□□□ -0.31
VPS72-205ENST00000491094 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
VPS72-205ENST00000491094 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
VPS72-205ENST00000491094 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 STK11IPQ8N1F8 1099 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
VPS72-205ENST00000491094 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 EPB41L2O43491 1005 aaKnown RBP13.13□□□□□ -0.31
VPS72-205ENST00000491094 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
VPS72-205ENST00000491094 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 ZNF75DP51815 510 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 TECPR2O15040 1411 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
VPS72-205ENST00000491094 CYP21A2P08686 494 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
VPS72-205ENST00000491094 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS72-205ENST00000491094 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
VPS72-205ENST00000491094 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS72-205ENST00000491094 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
VPS72-205ENST00000491094 TPM3P06753 285 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
VPS72-205ENST00000491094 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 SCRN1Q12765 414 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
VPS72-205ENST00000491094 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
VPS72-205ENST00000491094 C3P01024 1663 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 GCKRQ14397 625 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
VPS72-205ENST00000491094 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 MTX1Q13505 466 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 TTLL5Q6EMB2 1281 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
VPS72-205ENST00000491094 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
VPS72-205ENST00000491094 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 A0A1B0GVL5 298 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms