RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SRCAPQ6ZRS2 3230 aa23.23■■□□□ 1.31
MCF2L-230ENST00000491028 CCDC152Q4G0S7 254 aa23.23■■□□□ 1.31
MCF2L-230ENST00000491028 CCDC24Q8N4L8 307 aa23.23■■□□□ 1.31
MCF2L-230ENST00000491028 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
MCF2L-230ENST00000491028 SRGAP3O43295 1099 aa23.22■■□□□ 1.31
MCF2L-230ENST00000491028 SSH3Q8TE77 659 aa23.22■■□□□ 1.31
MCF2L-230ENST00000491028 SPON1Q9HCB6 807 aa23.22■■□□□ 1.31
MCF2L-230ENST00000491028 PNMA6EA0A0J9YXQ4 647 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-230ENST00000491028 PDE6BP35913 854 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 PTGER2P43116 358 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 HDAC1Q13547 482 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-230ENST00000491028 POLA2Q14181 598 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 CRY2Q49AN0 593 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 SIRT2Q8IXJ6 389 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 CHMP3Q9Y3E7 222 aa23.21■■□□□ 1.31
MCF2L-230ENST00000491028 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-230ENST00000491028 FAM161AQ3B820 660 aa23.2■■□□□ 1.3
MCF2L-230ENST00000491028 C3orf67Q6ZVT6 689 aa23.2■■□□□ 1.3
MCF2L-230ENST00000491028 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
MCF2L-230ENST00000491028 LRP5O75197 1615 aa23.19■■□□□ 1.3
MCF2L-230ENST00000491028 IFIT5Q13325 482 aaKnown RBP23.19■■□□□ 1.3
MCF2L-230ENST00000491028 CCDC57Q2TAC2 916 aa23.19■■□□□ 1.3
MCF2L-230ENST00000491028 RWDD1Q9H446 243 aaPredicted RBP23.19■■□□□ 1.3
MCF2L-230ENST00000491028 GREM2Q9H772 168 aa23.19■■□□□ 1.3
MCF2L-230ENST00000491028 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
MCF2L-230ENST00000491028 ANKRD18BA2A2Z9 1011 aa23.18■■□□□ 1.3
MCF2L-230ENST00000491028 ITGA6P23229 1130 aa23.17■■□□□ 1.3
MCF2L-230ENST00000491028 RFX5P48382 616 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-230ENST00000491028 CCDC136Q96JN2 1154 aa23.17■■□□□ 1.3
MCF2L-230ENST00000491028 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-230ENST00000491028 RPGRQ92834 1020 aaKnown RBP23.16■■□□□ 1.3
MCF2L-230ENST00000491028 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
MCF2L-230ENST00000491028 DDX46Q7L014 1031 aaKnown RBP23.15■■□□□ 1.3
MCF2L-230ENST00000491028 COPRSQ9NQ92 184 aa23.15■■□□□ 1.3
MCF2L-230ENST00000491028 KIAA1551Q9HCM1 1747 aa23.15■■□□□ 1.3
MCF2L-230ENST00000491028 SPEF2Q9C093 1822 aa23.15■■□□□ 1.3
MCF2L-230ENST00000491028 SRGNP10124 158 aa23.14■■□□□ 1.29
MCF2L-230ENST00000491028 HOXA10P31260 410 aaPredicted RBP23.14■■□□□ 1.29
MCF2L-230ENST00000491028 PTPN12Q05209 780 aaKnown RBP23.14■■□□□ 1.29
MCF2L-230ENST00000491028 TAF7LQ5H9L4 462 aa23.14■■□□□ 1.29
MCF2L-230ENST00000491028 RBM17Q96I25 401 aaKnown RBP23.14■■□□□ 1.29
MCF2L-230ENST00000491028 FBXO3Q9UK99 471 aa23.14■■□□□ 1.29
MCF2L-230ENST00000491028 NPR1P16066 1061 aa23.13■■□□□ 1.29
MCF2L-230ENST00000491028 NOP58Q9Y2X3 529 aaKnown RBP23.13■■□□□ 1.29
MCF2L-230ENST00000491028 H0YIN7 160 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 IGHDP01880 384 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 TAF1P21675 1872 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 GRAPQ13588 217 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 HSP90AB4PQ58FF6 505 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 C2CD5Q86YS7 1000 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 GRAPLQ8TC17 118 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-230ENST00000491028 GCC1Q96CN9 775 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 DCTPP1Q9H773 170 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 CD2APQ9Y5K6 639 aa23.12■■□□□ 1.29
MCF2L-230ENST00000491028 IGHMBP2P38935 993 aaKnown RBP23.11■■□□□ 1.29
MCF2L-230ENST00000491028 TGFB2P61812 414 aa23.11■■□□□ 1.29
MCF2L-230ENST00000491028 STYK1Q6J9G0 422 aa23.11■■□□□ 1.29
MCF2L-230ENST00000491028 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
MCF2L-230ENST00000491028 COL4A1P02462 1669 aa23.11■■□□□ 1.29
MCF2L-230ENST00000491028 SURF6O75683 361 aaKnown RBP23.1■■□□□ 1.29
MCF2L-230ENST00000491028 CIAO1O76071 339 aa23.1■■□□□ 1.29
MCF2L-230ENST00000491028 B4GALNT3Q6L9W6 998 aa23.1■■□□□ 1.29
MCF2L-230ENST00000491028 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-230ENST00000491028 KLHDC4Q8TBB5 520 aa23.1■■□□□ 1.29
MCF2L-230ENST00000491028 PA2G4Q9UQ80 394 aaKnown RBP23.1■■□□□ 1.29
MCF2L-230ENST00000491028 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
MCF2L-230ENST00000491028 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
MCF2L-230ENST00000491028 SMC5Q8IY18 1101 aa23.09■■□□□ 1.29
MCF2L-230ENST00000491028 ZNF594Q96JF6 807 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-230ENST00000491028 MPHOSPH8Q99549 860 aa23.09■■□□□ 1.29
MCF2L-230ENST00000491028 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
MCF2L-230ENST00000491028 EYA2O00167 538 aa23.08■■□□□ 1.29
MCF2L-230ENST00000491028 RAB11FIP3O75154 756 aa23.08■■□□□ 1.29
MCF2L-230ENST00000491028 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.29
MCF2L-230ENST00000491028 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
MCF2L-230ENST00000491028 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
MCF2L-230ENST00000491028 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.29
MCF2L-230ENST00000491028 LRRC37AA6NMS7 1700 aa23.08■■□□□ 1.28
MCF2L-230ENST00000491028 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
MCF2L-230ENST00000491028 A0A1B0GUL6 1792 aa23.07■■□□□ 1.28
MCF2L-230ENST00000491028 LDHAL6AQ6ZMR3 332 aa23.07■■□□□ 1.28
MCF2L-230ENST00000491028 TMC4Q7Z404 712 aa23.07■■□□□ 1.28
MCF2L-230ENST00000491028 ERC1Q8IUD2 1116 aa23.07■■□□□ 1.28
MCF2L-230ENST00000491028 SIL1Q9H173 461 aa23.07■■□□□ 1.28
MCF2L-230ENST00000491028 BSDC1Q9NW68 430 aaPredicted RBP23.07■■□□□ 1.28
MCF2L-230ENST00000491028 BBOX1O75936 387 aa23.06■■□□□ 1.28
MCF2L-230ENST00000491028 CHRNA5P30532 468 aa23.06■■□□□ 1.28
MCF2L-230ENST00000491028 IL15P40933 162 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-230ENST00000491028 OS9Q13438 667 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-230ENST00000491028 CNKSR1Q969H4 720 aa23.06■■□□□ 1.28
MCF2L-230ENST00000491028 ATG9AQ7Z3C6 839 aa23.05■■□□□ 1.28
MCF2L-230ENST00000491028 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
MCF2L-230ENST00000491028 CNNM1Q9NRU3 951 aa23.05■■□□□ 1.28
MCF2L-230ENST00000491028 DPEP1P16444 411 aa23.04■■□□□ 1.28
MCF2L-230ENST00000491028 LRRC24Q50LG9 513 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms