RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 RTFDC1Q9BY42 306 aaPredicted RBP20.28■□□□□ 0.84
SCAMP3-208ENST00000490999 HCLS1P14317 486 aaPredicted RBP20.27■□□□□ 0.84
SCAMP3-208ENST00000490999 KIAA2012Q0VF49 1180 aa20.27■□□□□ 0.84
SCAMP3-208ENST00000490999 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
SCAMP3-208ENST00000490999 SUPT20HQ8NEM7 779 aa20.27■□□□□ 0.84
SCAMP3-208ENST00000490999 YDJCA8MPS7 323 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 MPNDQ8N594 471 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 HHIPL1Q96JK4 782 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 LAMB2P55268 1798 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 CDHR2Q9BYE9 1310 aa20.26■□□□□ 0.83
SCAMP3-208ENST00000490999 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 EIF2S2P20042 333 aaKnown RBP20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 HUNKP57058 714 aa20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 MICALL2Q8IY33 904 aa20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 PGAP2Q9UHJ9 254 aa20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SCAMP3-208ENST00000490999 NEFMP07197 916 aa20.24■□□□□ 0.83
SCAMP3-208ENST00000490999 PDIA6Q15084 440 aa20.24■□□□□ 0.83
SCAMP3-208ENST00000490999 NFE2L2Q16236 605 aa20.24■□□□□ 0.83
SCAMP3-208ENST00000490999 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
SCAMP3-208ENST00000490999 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
SCAMP3-208ENST00000490999 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
SCAMP3-208ENST00000490999 EGFRP00533 1210 aa20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 NOGQ13253 232 aa20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 TNIP1Q15025 636 aa20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 SP8Q8IXZ3 490 aa20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 ZC3H15Q8WU90 426 aaKnown RBP20.22■□□□□ 0.83
SCAMP3-208ENST00000490999 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 ADM5C9JUS6 153 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 SOX10P56693 466 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 AIMP1Q12904 312 aaKnown RBP20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 GRAPQ13588 217 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 NLRP10Q86W26 655 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 COL4A1P02462 1669 aa20.21■□□□□ 0.83
SCAMP3-208ENST00000490999 LRRC37AA6NMS7 1700 aa20.2■□□□□ 0.82
SCAMP3-208ENST00000490999 BBOX1O75936 387 aa20.2■□□□□ 0.82
SCAMP3-208ENST00000490999 DDX46Q7L014 1031 aaKnown RBP20.2■□□□□ 0.82
SCAMP3-208ENST00000490999 DBNDD1Q9H9R9 158 aa20.2■□□□□ 0.82
SCAMP3-208ENST00000490999 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
SCAMP3-208ENST00000490999 H7C1D1 291 aa20.19■□□□□ 0.82
SCAMP3-208ENST00000490999 PSMD14O00487 310 aa20.19■□□□□ 0.82
SCAMP3-208ENST00000490999 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
SCAMP3-208ENST00000490999 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-208ENST00000490999 TAF1P21675 1872 aa20.18■□□□□ 0.82
SCAMP3-208ENST00000490999 FAM155AB1AL88 458 aaPredicted RBP20.18■□□□□ 0.82
SCAMP3-208ENST00000490999 COPS6Q7L5N1 327 aa20.18■□□□□ 0.82
SCAMP3-208ENST00000490999 KRT26Q7Z3Y9 468 aa20.18■□□□□ 0.82
SCAMP3-208ENST00000490999 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
SCAMP3-208ENST00000490999 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
SCAMP3-208ENST00000490999 GBA2Q9HCG7 927 aaPredicted RBP20.17■□□□□ 0.82
SCAMP3-208ENST00000490999 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
SCAMP3-208ENST00000490999 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
SCAMP3-208ENST00000490999 RTL9Q8NET4 1388 aa20.16■□□□□ 0.82
SCAMP3-208ENST00000490999 PDE4DIPQ5VU43 2346 aa20.16■□□□□ 0.82
SCAMP3-208ENST00000490999 KIF23Q02241 960 aaPredicted RBP20.15■□□□□ 0.82
SCAMP3-208ENST00000490999 HSP90AB3PQ58FF7 597 aa20.15■□□□□ 0.82
SCAMP3-208ENST00000490999 CELF1Q92879 486 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-208ENST00000490999 KCNQ5Q9NR82 932 aa20.15■□□□□ 0.82
SCAMP3-208ENST00000490999 ASTN2O75129 1339 aaPredicted RBP20.15■□□□□ 0.82
SCAMP3-208ENST00000490999 DDX60Q8IY21 1712 aaKnown RBP20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 ZNF157P51786 506 aaPredicted RBP20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 KRT24Q2M2I5 525 aa20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 WASHC4Q2M389 1173 aa20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
SCAMP3-208ENST00000490999 ECE2O60344 883 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 TRPA1O75762 1119 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 TCIRG1Q13488 830 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 DPF2Q92785 391 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 RNF186Q9NXI6 227 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
SCAMP3-208ENST00000490999 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 GPSM2P81274 684 aa20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 C2orf69Q8N8R5 385 aa20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 SAGE1Q9NXZ1 904 aa20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 POLLQ9UGP5 575 aa20.12■□□□□ 0.81
SCAMP3-208ENST00000490999 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
SCAMP3-208ENST00000490999 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
SCAMP3-208ENST00000490999 SLC10A3P09131 477 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 RIPK4P57078 832 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 TMC4Q7Z404 712 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 CHPF2Q9P2E5 772 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
SCAMP3-208ENST00000490999 ATP5J2-PTCD1G3V325 749 aa20.09■□□□□ 0.81
SCAMP3-208ENST00000490999 CCDC102AQ96A19 550 aa20.09■□□□□ 0.81
SCAMP3-208ENST00000490999 CDCA5Q96FF9 252 aa20.09■□□□□ 0.81
SCAMP3-208ENST00000490999 RPS12P25398 132 aaKnown RBP20.08■□□□□ 0.81
SCAMP3-208ENST00000490999 SULF1Q8IWU6 871 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms