RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 ZNF589Q86UQ0 364 aaPredicted RBP31.86■■■□□ 2.69
KCNC4-207ENST00000489935 ZBTB38Q8NAP3 1195 aaPredicted RBP31.86■■■□□ 2.69
KCNC4-207ENST00000489935 ZBTB1Q9Y2K1 713 aa31.86■■■□□ 2.69
KCNC4-207ENST00000489935 MCTP1Q6DN14 999 aa31.85■■■□□ 2.69
KCNC4-207ENST00000489935 RUFY3Q7L099 469 aa31.85■■■□□ 2.69
KCNC4-207ENST00000489935 JAKMIP1Q96N16 626 aaKnown RBP31.85■■■□□ 2.69
KCNC4-207ENST00000489935 LARP6Q9BRS8 491 aaKnown RBP31.85■■■□□ 2.69
KCNC4-207ENST00000489935 CDCA7Q9BWT1 371 aaPredicted RBP31.85■■■□□ 2.69
KCNC4-207ENST00000489935 TM6SF1Q9BZW5 370 aa31.85■■■□□ 2.69
KCNC4-207ENST00000489935 ZSWIM6Q9HCJ5 1215 aa31.85■■■□□ 2.69
KCNC4-207ENST00000489935 SYNE4Q8N205 404 aa31.84■■■□□ 2.69
KCNC4-207ENST00000489935 PLA2G12BQ9BX93 195 aa31.84■■■□□ 2.69
KCNC4-207ENST00000489935 FSD2A1L4K1 749 aa31.83■■■□□ 2.69
KCNC4-207ENST00000489935 CHGBP05060 677 aa31.83■■■□□ 2.69
KCNC4-207ENST00000489935 CCDC57Q2TAC2 916 aa31.83■■■□□ 2.69
KCNC4-207ENST00000489935 LIMCH1Q9UPQ0 1083 aa31.83■■■□□ 2.69
KCNC4-207ENST00000489935 THRAP3Q9Y2W1 955 aaKnown RBP31.83■■■□□ 2.69
KCNC4-207ENST00000489935 SLC27A2O14975 620 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 CSF1RP07333 972 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 GPTP24298 496 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 KCNJ4P48050 445 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 DDB1Q16531 1140 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 NLRP10Q86W26 655 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 JCADQ9P266 1359 aa31.82■■■□□ 2.68
KCNC4-207ENST00000489935 NUTM2BA6NNL0 878 aaPredicted RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 NUTM2EB1AL46 878 aaPredicted RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 DDX46Q7L014 1031 aaKnown RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 NUTM2AQ8IVF1 878 aaPredicted RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 CCDC85AQ96PX6 553 aaPredicted RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 ZNF609O15014 1411 aa31.81■■■□□ 2.68
KCNC4-207ENST00000489935 BRD1O95696 1058 aa31.81■■■□□ 2.68
KCNC4-207ENST00000489935 ZKSCAN1P17029 563 aaPredicted RBP31.81■■■□□ 2.68
KCNC4-207ENST00000489935 RFX7Q2KHR2 1363 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 NUP98P52948 1817 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 TAF5LO75529 589 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 VPS53Q5VIR6 699 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 FOXD4L5Q5VV16 416 aaPredicted RBP31.8■■■□□ 2.68
KCNC4-207ENST00000489935 FOXD4L4Q8WXT5 416 aaPredicted RBP31.8■■■□□ 2.68
KCNC4-207ENST00000489935 PDRG1Q9NUG6 133 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 ANKRD36CQ5JPF3 1778 aa31.8■■■□□ 2.68
KCNC4-207ENST00000489935 BRPF3Q9ULD4 1205 aa31.79■■■□□ 2.68
KCNC4-207ENST00000489935 CYP46A1Q9Y6A2 500 aa31.79■■■□□ 2.68
KCNC4-207ENST00000489935 A0A1B0GUL7 405 aa31.79■■■□□ 2.68
KCNC4-207ENST00000489935 CHAMP1Q96JM3 812 aa31.79■■■□□ 2.68
KCNC4-207ENST00000489935 MARCH10Q8NA82 808 aaPredicted RBP31.78■■■□□ 2.68
KCNC4-207ENST00000489935 LMBRD1Q9NUN5 540 aa31.78■■■□□ 2.68
KCNC4-207ENST00000489935 GOLGA6L3A6NEY3 463 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 HSP90AB3PQ58FF7 597 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 KBTBD3Q8NAB2 608 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 CEP126Q9P2H0 1117 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 CDHR2Q9BYE9 1310 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 SPATA31A5Q5VU36 1347 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 SPATA31A7Q8IWB4 1347 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 COL9A3Q14050 684 aaPredicted RBP31.77■■■□□ 2.68
KCNC4-207ENST00000489935 L1TD1Q5T7N2 865 aaKnown RBP31.77■■■□□ 2.68
KCNC4-207ENST00000489935 ACSBG1Q96GR2 724 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 SEC62Q99442 399 aaKnown RBP31.77■■■□□ 2.68
KCNC4-207ENST00000489935 TBC1D2BQ9UPU7 963 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 TAF6LQ9Y6J9 622 aa31.77■■■□□ 2.68
KCNC4-207ENST00000489935 RPAP1Q9BWH6 1393 aaPredicted RBP31.76■■■□□ 2.68
KCNC4-207ENST00000489935 IL6STP40189 918 aaPredicted RBP31.76■■■□□ 2.68
KCNC4-207ENST00000489935 LARGE1O95461 756 aa31.76■■■□□ 2.67
KCNC4-207ENST00000489935 PAG1Q9NWQ8 432 aa31.76■■■□□ 2.67
KCNC4-207ENST00000489935 FBXO3Q9UK99 471 aa31.76■■■□□ 2.67
KCNC4-207ENST00000489935 GOLIM4O00461 696 aa31.75■■■□□ 2.67
KCNC4-207ENST00000489935 PIP4K2BP78356 416 aa31.75■■■□□ 2.67
KCNC4-207ENST00000489935 CCDC129Q6ZRS4 1044 aa31.75■■■□□ 2.67
KCNC4-207ENST00000489935 IFIT5Q13325 482 aaKnown RBP31.74■■■□□ 2.67
KCNC4-207ENST00000489935 KLHL40Q2TBA0 621 aa31.74■■■□□ 2.67
KCNC4-207ENST00000489935 USPL1Q5W0Q7 1092 aa31.74■■■□□ 2.67
KCNC4-207ENST00000489935 DZIP3Q86Y13 1208 aaKnown RBP31.74■■■□□ 2.67
KCNC4-207ENST00000489935 DDX49Q9Y6V7 483 aaKnown RBP31.74■■■□□ 2.67
KCNC4-207ENST00000489935 MCMDC2Q4G0Z9 681 aa31.74■■■□□ 2.67
KCNC4-207ENST00000489935 RNF20Q5VTR2 975 aa31.74■■■□□ 2.67
KCNC4-207ENST00000489935 PALLDQ8WX93 1383 aa31.73■■■□□ 2.67
KCNC4-207ENST00000489935 A0A0G2JS52 829 aa31.73■■■□□ 2.67
KCNC4-207ENST00000489935 ERVV-1B6SEH8 477 aa31.73■■■□□ 2.67
KCNC4-207ENST00000489935 TTLL11Q8NHH1 800 aa31.73■■■□□ 2.67
KCNC4-207ENST00000489935 MYH3P11055 1940 aa31.71■■■□□ 2.67
KCNC4-207ENST00000489935 PRPF40AO75400 957 aaKnown RBP31.71■■■□□ 2.67
KCNC4-207ENST00000489935 IFIT1P09914 478 aaKnown RBP31.71■■■□□ 2.67
KCNC4-207ENST00000489935 PSMA5P28066 241 aa31.71■■■□□ 2.67
KCNC4-207ENST00000489935 TSGA10IPQ3SY00 556 aa31.71■■■□□ 2.67
KCNC4-207ENST00000489935 SLFNL1Q499Z3 407 aa31.71■■■□□ 2.67
KCNC4-207ENST00000489935 TAF7LQ5H9L4 462 aa31.71■■■□□ 2.67
KCNC4-207ENST00000489935 INTS5Q6P9B9 1019 aaKnown RBP31.71■■■□□ 2.67
KCNC4-207ENST00000489935 GREM2Q9H772 168 aa31.7■■■□□ 2.67
KCNC4-207ENST00000489935 TRMT112Q9UI30 125 aaKnown RBP31.7■■■□□ 2.67
KCNC4-207ENST00000489935 NWD2Q9ULI1 1742 aa31.7■■■□□ 2.67
KCNC4-207ENST00000489935 SLIT2O94813 1529 aa31.7■■■□□ 2.67
KCNC4-207ENST00000489935 IRS4O14654 1257 aaPredicted RBP31.7■■■□□ 2.66
KCNC4-207ENST00000489935 XRCC6P12956 609 aaKnown RBP eCLIP31.7■■■□□ 2.66
KCNC4-207ENST00000489935 ADORA1P30542 326 aa31.7■■■□□ 2.66
KCNC4-207ENST00000489935 HMG20BQ9P0W2 317 aa31.7■■■□□ 2.66
KCNC4-207ENST00000489935 AKAP2Q9Y2D5 859 aa31.7■■■□□ 2.66
KCNC4-207ENST00000489935 EIF5P55010 431 aaKnown RBP31.69■■■□□ 2.66
KCNC4-207ENST00000489935 CTSWP56202 376 aa31.69■■■□□ 2.66
KCNC4-207ENST00000489935 ZNF34Q8IZ26 560 aa31.69■■■□□ 2.66
KCNC4-207ENST00000489935 UBN2Q6ZU65 1347 aa31.69■■■□□ 2.66
KCNC4-207ENST00000489935 SH3TC1Q8TE82 1336 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms