RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
SPATA9-206ENST00000489917 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.25
SPATA9-206ENST00000489917 KCNH4Q9UQ05 1017 aa7.27□□□□□ -1.25
SPATA9-206ENST00000489917 KIAA0586Q9BVV6 1533 aa7.27□□□□□ -1.25
SPATA9-206ENST00000489917 NUP160Q12769 1436 aa7.27□□□□□ -1.25
SPATA9-206ENST00000489917 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.25
SPATA9-206ENST00000489917 SAMD9Q5K651 1589 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 ZBTB7CA1YPR0 619 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 SYT9Q86SS6 491 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
SPATA9-206ENST00000489917 MYO19Q96H55 970 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPATA9-206ENST00000489917 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
SPATA9-206ENST00000489917 SLAIN2Q9P270 581 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
SPATA9-206ENST00000489917 IRS1P35568 1242 aa7.25□□□□□ -1.25
SPATA9-206ENST00000489917 SNRPNP63162 240 aaKnown RBP7.25□□□□□ -1.25
SPATA9-206ENST00000489917 SPEM2Q0P670 501 aa7.25□□□□□ -1.25
SPATA9-206ENST00000489917 RAB44Q7Z6P3 723 aaPredicted RBP7.25□□□□□ -1.25
SPATA9-206ENST00000489917 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
SPATA9-206ENST00000489917 UGGT2Q9NYU1 1516 aa7.25□□□□□ -1.25
SPATA9-206ENST00000489917 HOXB4P17483 251 aaPredicted RBP7.24□□□□□ -1.25
SPATA9-206ENST00000489917 AMPD1P23109 780 aa7.24□□□□□ -1.25
SPATA9-206ENST00000489917 RASSF7Q02833 373 aa7.24□□□□□ -1.25
SPATA9-206ENST00000489917 C11orf91Q3C1V1 193 aa7.24□□□□□ -1.25
SPATA9-206ENST00000489917 COX20Q5RI15 118 aa7.24□□□□□ -1.25
SPATA9-206ENST00000489917 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
SPATA9-206ENST00000489917 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
SPATA9-206ENST00000489917 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 RRAGCQ9HB90 399 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 FHOD3Q2V2M9 1422 aa7.23□□□□□ -1.25
SPATA9-206ENST00000489917 SIN3BO75182 1162 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 MICAL2O94851 1124 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 GRNP28799 593 aaKnown RBP7.22□□□□□ -1.25
SPATA9-206ENST00000489917 INPP5BP32019 993 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 IDH3AP50213 366 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 CHSY3Q70JA7 882 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 COL26A1Q96A83 441 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 MDFIQ99750 246 aa7.22□□□□□ -1.25
SPATA9-206ENST00000489917 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
SPATA9-206ENST00000489917 ELOA3DA6NLF2 546 aaPredicted RBP7.21□□□□□ -1.26
SPATA9-206ENST00000489917 PHF20L1A8MW92 1017 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 GDF11O95390 407 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 ELOA3BQ3SY89 546 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 KANK3Q6NY19 840 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 RETREG2Q8NC44 543 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 ELOA3Q8NG57 546 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 BHMTQ93088 406 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 IFT43Q96FT9 208 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
SPATA9-206ENST00000489917 KIAA0556O60303 1618 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 TMEM88BA6NKF7 163 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 ATP2B4P23634 1241 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 DGKGP49619 791 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 ARSDP51689 593 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
SPATA9-206ENST00000489917 C16orf46Q6P387 395 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 LINC00114Q6XXX2 140 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 MKL2Q9ULH7 1088 aa7.2□□□□□ -1.26
SPATA9-206ENST00000489917 PCF11O94913 1555 aaKnown RBP7.2□□□□□ -1.26
SPATA9-206ENST00000489917 CLASP1Q7Z460 1538 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 OPLAHO14841 1288 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 PTCD1O75127 700 aaKnown RBP7.19□□□□□ -1.26
SPATA9-206ENST00000489917 EPB42P16452 691 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 CCINQ13939 588 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 TREML1Q86YW5 311 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 CCDC9Q9Y3X0 531 aaKnown RBP7.19□□□□□ -1.26
SPATA9-206ENST00000489917 SHROOM2Q13796 1616 aa7.19□□□□□ -1.26
SPATA9-206ENST00000489917 FMN1Q68DA7 1419 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 CASKIN1Q8WXD9 1431 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 CDK11BP21127 795 aaKnown RBP7.18□□□□□ -1.26
SPATA9-206ENST00000489917 ALAS2P22557 587 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 ETFBKMTQ8IXQ9 262 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
SPATA9-206ENST00000489917 USP20Q9Y2K6 914 aa7.18□□□□□ -1.26
SPATA9-206ENST00000489917 FYCO1Q9BQS8 1478 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 MAP3K1Q13233 1512 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 CARNS1A5YM72 827 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 HMGB1P09429 215 aaKnown RBP7.17□□□□□ -1.26
SPATA9-206ENST00000489917 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
SPATA9-206ENST00000489917 ADH7P40394 386 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 EFCC1Q9HA90 598 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 USTQ9Y2C2 406 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
SPATA9-206ENST00000489917 CARMIL2Q6F5E8 1435 aa7.17□□□□□ -1.26
SPATA9-206ENST00000489917 LRRIQ1Q96JM4 1722 aa7.16□□□□□ -1.26
SPATA9-206ENST00000489917 NFKB1P19838 968 aa7.16□□□□□ -1.26
SPATA9-206ENST00000489917 SCNN1AP37088 669 aa7.16□□□□□ -1.26
SPATA9-206ENST00000489917 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms