RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
SPATA9-206ENST00000489917 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
SPATA9-206ENST00000489917 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
SPATA9-206ENST00000489917 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
SPATA9-206ENST00000489917 FOXD1Q16676 465 aa17.34■□□□□ 0.37
SPATA9-206ENST00000489917 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
SPATA9-206ENST00000489917 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
SPATA9-206ENST00000489917 ADRA2BP18089 450 aa16.52■□□□□ 0.24
SPATA9-206ENST00000489917 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
SPATA9-206ENST00000489917 MSH5O43196 834 aa16.07■□□□□ 0.16
SPATA9-206ENST00000489917 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
SPATA9-206ENST00000489917 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
SPATA9-206ENST00000489917 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
SPATA9-206ENST00000489917 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
SPATA9-206ENST00000489917 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
SPATA9-206ENST00000489917 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
SPATA9-206ENST00000489917 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
SPATA9-206ENST00000489917 KCNA4P22459 653 aa14.58□□□□□ -0.08
SPATA9-206ENST00000489917 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
SPATA9-206ENST00000489917 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
SPATA9-206ENST00000489917 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
SPATA9-206ENST00000489917 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
SPATA9-206ENST00000489917 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
SPATA9-206ENST00000489917 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
SPATA9-206ENST00000489917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPATA9-206ENST00000489917 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
SPATA9-206ENST00000489917 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
SPATA9-206ENST00000489917 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
SPATA9-206ENST00000489917 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
SPATA9-206ENST00000489917 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
SPATA9-206ENST00000489917 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
SPATA9-206ENST00000489917 ZBTB22O15209 634 aa13.43□□□□□ -0.26
SPATA9-206ENST00000489917 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
SPATA9-206ENST00000489917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
SPATA9-206ENST00000489917 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
SPATA9-206ENST00000489917 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
SPATA9-206ENST00000489917 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
SPATA9-206ENST00000489917 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
SPATA9-206ENST00000489917 APLP2Q06481 763 aa13.19□□□□□ -0.3
SPATA9-206ENST00000489917 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
SPATA9-206ENST00000489917 CAPN15O75808 1086 aa13.18□□□□□ -0.3
SPATA9-206ENST00000489917 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
SPATA9-206ENST00000489917 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
SPATA9-206ENST00000489917 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
SPATA9-206ENST00000489917 DSG3P32926 999 aa13.01□□□□□ -0.33
SPATA9-206ENST00000489917 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
SPATA9-206ENST00000489917 ABCB7O75027 752 aa12.93□□□□□ -0.34
SPATA9-206ENST00000489917 POLA2Q14181 598 aa12.83□□□□□ -0.36
SPATA9-206ENST00000489917 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
SPATA9-206ENST00000489917 FBLN2P98095 1184 aa12.46□□□□□ -0.41
SPATA9-206ENST00000489917 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SPATA9-206ENST00000489917 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
SPATA9-206ENST00000489917 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
SPATA9-206ENST00000489917 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
SPATA9-206ENST00000489917 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
SPATA9-206ENST00000489917 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
SPATA9-206ENST00000489917 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
SPATA9-206ENST00000489917 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
SPATA9-206ENST00000489917 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
SPATA9-206ENST00000489917 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
SPATA9-206ENST00000489917 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
SPATA9-206ENST00000489917 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPATA9-206ENST00000489917 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
SPATA9-206ENST00000489917 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
SPATA9-206ENST00000489917 POTEHQ6S545 545 aa11.94□□□□□ -0.5
SPATA9-206ENST00000489917 FKBP8Q14318 412 aa11.93□□□□□ -0.5
SPATA9-206ENST00000489917 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
SPATA9-206ENST00000489917 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
SPATA9-206ENST00000489917 PROM2Q8N271 834 aa11.86□□□□□ -0.51
SPATA9-206ENST00000489917 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPATA9-206ENST00000489917 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
SPATA9-206ENST00000489917 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
SPATA9-206ENST00000489917 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
SPATA9-206ENST00000489917 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
SPATA9-206ENST00000489917 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
SPATA9-206ENST00000489917 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
SPATA9-206ENST00000489917 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
SPATA9-206ENST00000489917 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
SPATA9-206ENST00000489917 MIER1Q8N108 512 aa11.46□□□□□ -0.57
SPATA9-206ENST00000489917 HAX1O00165 279 aa11.44□□□□□ -0.58
SPATA9-206ENST00000489917 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
SPATA9-206ENST00000489917 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
SPATA9-206ENST00000489917 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
SPATA9-206ENST00000489917 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
SPATA9-206ENST00000489917 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
SPATA9-206ENST00000489917 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPATA9-206ENST00000489917 EVX2Q03828 476 aa11.35□□□□□ -0.59
SPATA9-206ENST00000489917 SP7Q8TDD2 431 aaPredicted RBP11.34□□□□□ -0.59
SPATA9-206ENST00000489917 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
SPATA9-206ENST00000489917 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
SPATA9-206ENST00000489917 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
SPATA9-206ENST00000489917 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
SPATA9-206ENST00000489917 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
SPATA9-206ENST00000489917 NUBP1P53384 320 aa11.21□□□□□ -0.61
SPATA9-206ENST00000489917 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
SPATA9-206ENST00000489917 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
SPATA9-206ENST00000489917 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
SPATA9-206ENST00000489917 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
SPATA9-206ENST00000489917 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
SPATA9-206ENST00000489917 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms