RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NYAP1Q6ZVC0 841 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 FILIP1Q7Z7B0 1213 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TMEM57Q8N5G2 664 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 PPM1EQ8WY54 764 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 GTF3C6Q969F1 213 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 EXOC4Q96A65 974 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TMX3Q96JJ7 454 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 KCND1Q9NSA2 647 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 RBM28Q9NW13 759 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ARGLU1Q9NWB6 273 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 SUFUQ9UMX1 484 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ELP1O95163 1332 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 WDR33Q9C0J8 1336 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ZNF644Q9H582 1327 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 DISP1Q96F81 1524 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 MAP3K4Q9Y6R4 1608 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 BHMG1C9JSJ3 638 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 SMARCA5O60264 1052 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ZRANB2O95218 330 aaKnown RBP eCLIP5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TPM1P09493 284 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC192P0DO97 292 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ATP6V1AP38606 617 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TDO2P48775 406 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TSGA10IPQ3SY00 556 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 MCTP2Q6DN12 878 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 TMCO3Q6UWJ1 677 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 LRRN4Q8WUT4 740 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 ZNF592Q92610 1267 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 SMARCE1Q969G3 411 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 PCDHGC3Q9UN70 934 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 CUL7Q14999 1698 aa5.62□□□□□ -1.51
SNRNP40-206ENST00000489853 POLR3GO15318 223 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 RPS6KA5O75582 802 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 ZNF853P0CG23 659 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 CALRP27797 417 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 ACTN2P35609 894 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 PACS2Q86VP3 889 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 DRC7Q8IY82 874 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 RDH13Q8NBN7 331 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 FAM200AQ8TCP9 573 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 SSH1Q8WYL5 1049 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 UCN2Q96RP3 112 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 SLC4A5Q9BY07 1137 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 L2HGDHQ9H9P8 463 aa5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 NOB1Q9ULX3 412 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-206ENST00000489853 CPP00450 1065 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 CDC25BP30305 580 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 ZNF75DP51815 510 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 ST5P78524 1137 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 LRMPQ12912 555 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 TUSC1Q2TAM9 212 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 MMS22LQ6ZRQ5 1243 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PLEKHM2Q8IWE5 1019 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 ZBED2Q9BTP6 218 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PPP1R12CQ9BZL4 782 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 NDUFB9Q9Y6M9 179 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 IVNS1ABPQ9Y6Y0 642 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC189A1A4V9 331 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PALM3A6NDB9 673 aaPredicted RBP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PTPREP23469 700 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 LMOD1P29536 600 aaPredicted RBP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 MAP2K2P36507 400 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 NEK4P51957 841 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 CCDC93Q567U6 631 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 TTC22Q5TAA0 569 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 REXO1L1PQ8IX06 675 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 ANKRD20A12PQ8NF67 263 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 CACTINQ8WUQ7 758 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 TMEM134Q9H6X4 195 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 PNMA3Q9UL41 463 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 ATP6V1DQ9Y5K8 247 aa5.6□□□□□ -1.51
SNRNP40-206ENST00000489853 CLTCL1P53675 1640 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ADGBQ8N7X0 1667 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 GOLIM4O00461 696 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ZBTB7BO15156 539 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 GSPT1P15170 499 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 CORO7P57737 925 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 MAP2K1Q02750 393 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 SART3Q15020 963 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ERCC6LQ2NKX8 1250 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ALDH1L2Q3SY69 923 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 GIMAP6Q6P9H5 292 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 THSD4Q6ZMP0 1018 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 LEKR1Q6ZMV7 388 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 LRRC8AQ8IWT6 810 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 TRIM5Q9C035 493 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 MKRN1Q9UHC7 482 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 NRBP1Q9UHY1 535 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 SPAG9O60271 1321 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 RPAP1Q9BWH6 1393 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ATP10AO60312 1499 aa5.59□□□□□ -1.51
SNRNP40-206ENST00000489853 ITSN2Q9NZM3 1697 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms