RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 KIF13BQ9NQT8 1826 aa17.8■□□□□ 0.44
CLDN11-209ENST00000489485 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
CLDN11-209ENST00000489485 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
CLDN11-209ENST00000489485 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
CLDN11-209ENST00000489485 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
CLDN11-209ENST00000489485 GOLGB1Q14789 3259 aaKnown RBP17.79■□□□□ 0.44
CLDN11-209ENST00000489485 H0YIN7 160 aa17.79■□□□□ 0.44
CLDN11-209ENST00000489485 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
CLDN11-209ENST00000489485 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
CLDN11-209ENST00000489485 GREM2Q9H772 168 aa17.79■□□□□ 0.44
CLDN11-209ENST00000489485 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
CLDN11-209ENST00000489485 CSF1RP07333 972 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 CHRNA5P30532 468 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
CLDN11-209ENST00000489485 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 B4GALNT3Q6L9W6 998 aa17.78■□□□□ 0.44
CLDN11-209ENST00000489485 TAF1P21675 1872 aa17.77■□□□□ 0.44
CLDN11-209ENST00000489485 SRGAP3O43295 1099 aa17.77■□□□□ 0.43
CLDN11-209ENST00000489485 SRGNP10124 158 aa17.77■□□□□ 0.43
CLDN11-209ENST00000489485 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.43
CLDN11-209ENST00000489485 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.43
CLDN11-209ENST00000489485 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.43
CLDN11-209ENST00000489485 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.43
CLDN11-209ENST00000489485 COL11A2P13942 1736 aaPredicted RBP17.77■□□□□ 0.43
CLDN11-209ENST00000489485 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 ITGA6P23229 1130 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 TGFB2P61812 414 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
CLDN11-209ENST00000489485 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLDN11-209ENST00000489485 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 PDZRN3Q9UPQ7 1066 aa17.76■□□□□ 0.43
CLDN11-209ENST00000489485 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 NPR1P16066 1061 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
CLDN11-209ENST00000489485 ANKRD18BA2A2Z9 1011 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 DPEP1P16444 411 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
CLDN11-209ENST00000489485 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
CLDN11-209ENST00000489485 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
CLDN11-209ENST00000489485 MTX1Q13505 466 aa17.74■□□□□ 0.43
CLDN11-209ENST00000489485 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
CLDN11-209ENST00000489485 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 RTL9Q8NET4 1388 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 LRP5O75197 1615 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
CLDN11-209ENST00000489485 SIRT2Q8IXJ6 389 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
CLDN11-209ENST00000489485 CDC5LQ99459 802 aaKnown RBP17.73■□□□□ 0.43
CLDN11-209ENST00000489485 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
CLDN11-209ENST00000489485 DLEC1Q9Y238 1755 aa17.72■□□□□ 0.43
CLDN11-209ENST00000489485 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
CLDN11-209ENST00000489485 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
CLDN11-209ENST00000489485 SYT17Q9BSW7 474 aa17.72■□□□□ 0.43
CLDN11-209ENST00000489485 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
CLDN11-209ENST00000489485 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
CLDN11-209ENST00000489485 HMMRO75330 724 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 IGHDP01880 384 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 KCNA3P22001 575 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 GRAPQ13588 217 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
CLDN11-209ENST00000489485 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
CLDN11-209ENST00000489485 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.43
CLDN11-209ENST00000489485 SSH3Q8TE77 659 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 CNKSR1Q969H4 720 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 MPHOSPH8Q99549 860 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 PIM2Q9P1W9 311 aa17.71■□□□□ 0.43
CLDN11-209ENST00000489485 COL4A1P02462 1669 aa17.7■□□□□ 0.42
CLDN11-209ENST00000489485 SIL1Q9H173 461 aa17.7■□□□□ 0.42
CLDN11-209ENST00000489485 PA2G4Q9UQ80 394 aaKnown RBP17.7■□□□□ 0.42
CLDN11-209ENST00000489485 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
CLDN11-209ENST00000489485 PTPN12Q05209 780 aaKnown RBP17.69■□□□□ 0.42
CLDN11-209ENST00000489485 POLA2Q14181 598 aa17.69■□□□□ 0.42
CLDN11-209ENST00000489485 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
CLDN11-209ENST00000489485 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
CLDN11-209ENST00000489485 RWDD1Q9H446 243 aaPredicted RBP17.69■□□□□ 0.42
CLDN11-209ENST00000489485 PRPF40BQ6NWY9 871 aaKnown RBP17.69■□□□□ 0.42
CLDN11-209ENST00000489485 BBOX1O75936 387 aa17.68■□□□□ 0.42
CLDN11-209ENST00000489485 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
CLDN11-209ENST00000489485 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
CLDN11-209ENST00000489485 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
CLDN11-209ENST00000489485 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
CLDN11-209ENST00000489485 PPEF1O14829 653 aaPredicted RBP17.67■□□□□ 0.42
CLDN11-209ENST00000489485 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
CLDN11-209ENST00000489485 COPRSQ9NQ92 184 aa17.67■□□□□ 0.42
CLDN11-209ENST00000489485 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
CLDN11-209ENST00000489485 UTRNP46939 3433 aa17.67■□□□□ 0.42
CLDN11-209ENST00000489485 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
CLDN11-209ENST00000489485 BSDC1Q9NW68 430 aaPredicted RBP17.67■□□□□ 0.42
CLDN11-209ENST00000489485 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
CLDN11-209ENST00000489485 EXOC6BQ9Y2D4 811 aa17.66■□□□□ 0.42
CLDN11-209ENST00000489485 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms