RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 EFCC1Q9HA90 598 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 NPC1L1Q9UHC9 1359 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 ZNF646O15015 1829 aaPredicted RBP10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 NPR1P16066 1061 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 CAP1Q01518 475 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.67
EXOSC3-206ENST00000489414 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 ST5P78524 1137 aa10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 SREBF2Q12772 1141 aa10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
EXOSC3-206ENST00000489414 SHTN1A0MZ66 631 aa10.83□□□□□ -0.68
EXOSC3-206ENST00000489414 CXCL9Q07325 125 aa10.83□□□□□ -0.68
EXOSC3-206ENST00000489414 NIM1KQ8IY84 436 aa10.83□□□□□ -0.68
EXOSC3-206ENST00000489414 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
EXOSC3-206ENST00000489414 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
EXOSC3-206ENST00000489414 ZFHX4Q86UP3 3567 aa10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 KLRG2A4D1S0 409 aaPredicted RBP10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 EVI5O60447 810 aa10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 FKBP1BP68106 108 aa10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 ALPK3Q96L96 1907 aa10.82□□□□□ -0.68
EXOSC3-206ENST00000489414 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 FOXK2Q01167 660 aa10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 CDX2Q99626 313 aaPredicted RBP10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 LRFN3Q9BTN0 628 aa10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 ZBTB1Q9Y2K1 713 aa10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
EXOSC3-206ENST00000489414 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 RRS1Q15050 365 aaKnown RBP10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 CDCA5Q96FF9 252 aa10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 CNOT7Q9UIV1 285 aaKnown RBP10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 ZDBF2Q9HCK1 2354 aa10.8□□□□□ -0.68
EXOSC3-206ENST00000489414 SSC5DA1L4H1 1573 aa10.79□□□□□ -0.68
EXOSC3-206ENST00000489414 NPHP1O15259 732 aa10.79□□□□□ -0.68
EXOSC3-206ENST00000489414 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
EXOSC3-206ENST00000489414 BCL2L13Q9BXK5 485 aa10.79□□□□□ -0.68
EXOSC3-206ENST00000489414 USP34Q70CQ2 3546 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 H7C1D1 291 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 GABBR2O75899 941 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 MKRN3Q13064 507 aaKnown RBP10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 SH3TC2Q8TF17 1288 aa10.78□□□□□ -0.68
EXOSC3-206ENST00000489414 LAMB1P07942 1786 aa10.77□□□□□ -0.68
EXOSC3-206ENST00000489414 EGFRP00533 1210 aa10.77□□□□□ -0.69
EXOSC3-206ENST00000489414 ALDH1B1P30837 517 aa10.77□□□□□ -0.69
EXOSC3-206ENST00000489414 GJA8P48165 433 aa10.77□□□□□ -0.69
EXOSC3-206ENST00000489414 COG3Q96JB2 828 aa10.77□□□□□ -0.69
EXOSC3-206ENST00000489414 ZNRF3Q9ULT6 936 aa10.77□□□□□ -0.69
EXOSC3-206ENST00000489414 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 CABP4P57796 275 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 SULF1Q8IWU6 871 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
EXOSC3-206ENST00000489414 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 WDFY4Q6ZS81 3184 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 SP3Q02447 781 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 MTFR1Q15390 333 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 AOC3Q16853 763 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 IFNL1Q8IU54 200 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 UHRF1Q96T88 793 aaPredicted RBP10.75□□□□□ -0.69
EXOSC3-206ENST00000489414 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 HDGFL2Q7Z4V5 671 aaPredicted RBP10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 FLT4P35916 1363 aa10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
EXOSC3-206ENST00000489414 HSP90AB1P08238 724 aaKnown RBP10.73□□□□□ -0.69
EXOSC3-206ENST00000489414 TNIP1Q15025 636 aa10.73□□□□□ -0.69
EXOSC3-206ENST00000489414 MYLIPQ8WY64 445 aa10.73□□□□□ -0.69
EXOSC3-206ENST00000489414 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
EXOSC3-206ENST00000489414 GGA3Q9NZ52 723 aa10.73□□□□□ -0.69
EXOSC3-206ENST00000489414 A0A087WZG4 1122 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 IGF2BP3O00425 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 RAD17O75943 681 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 GJB1P08034 283 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 CRHR2Q13324 411 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 SLC51AQ86UW1 340 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 DPF2Q92785 391 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 UBE2OQ9C0C9 1292 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
EXOSC3-206ENST00000489414 XIRP2A4UGR9 3374 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms