RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
UFD1-209ENST00000489406 CEP290O15078 2479 aa20.43■□□□□ 0.86
UFD1-209ENST00000489406 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
UFD1-209ENST00000489406 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
UFD1-209ENST00000489406 DPP8Q6V1X1 898 aaPredicted RBP20.43■□□□□ 0.86
UFD1-209ENST00000489406 DPF2Q92785 391 aa20.43■□□□□ 0.86
UFD1-209ENST00000489406 CDCA5Q96FF9 252 aa20.43■□□□□ 0.86
UFD1-209ENST00000489406 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
UFD1-209ENST00000489406 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
UFD1-209ENST00000489406 OTUD5Q96G74 571 aa20.42■□□□□ 0.86
UFD1-209ENST00000489406 R3HDMLQ9H3Y0 253 aa20.42■□□□□ 0.86
UFD1-209ENST00000489406 KIAA0100Q14667 2235 aaKnown RBP20.42■□□□□ 0.86
UFD1-209ENST00000489406 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
UFD1-209ENST00000489406 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
UFD1-209ENST00000489406 H0YGN5 161 aa20.4■□□□□ 0.86
UFD1-209ENST00000489406 SIPA1L3O60292 1781 aaPredicted RBP20.4■□□□□ 0.86
UFD1-209ENST00000489406 MPNDQ8N594 471 aa20.4■□□□□ 0.86
UFD1-209ENST00000489406 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
UFD1-209ENST00000489406 HTTP42858 3142 aa20.4■□□□□ 0.86
UFD1-209ENST00000489406 PSMD14O00487 310 aa20.39■□□□□ 0.85
UFD1-209ENST00000489406 TM4SF4P48230 202 aa20.39■□□□□ 0.85
UFD1-209ENST00000489406 GGA3Q9NZ52 723 aa20.39■□□□□ 0.85
UFD1-209ENST00000489406 ASTN2O75129 1339 aaPredicted RBP20.38■□□□□ 0.85
UFD1-209ENST00000489406 CHRDL2Q6WN34 429 aa20.38■□□□□ 0.85
UFD1-209ENST00000489406 MOB2Q70IA6 237 aa20.38■□□□□ 0.85
UFD1-209ENST00000489406 RBBP6Q7Z6E9 1792 aaKnown RBP20.37■□□□□ 0.85
UFD1-209ENST00000489406 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
UFD1-209ENST00000489406 GPTP24298 496 aa20.37■□□□□ 0.85
UFD1-209ENST00000489406 MKRN3Q13064 507 aaKnown RBP20.37■□□□□ 0.85
UFD1-209ENST00000489406 UBE2Q2LH0YL09 131 aa20.36■□□□□ 0.85
UFD1-209ENST00000489406 FKBP1BP68106 108 aa20.36■□□□□ 0.85
UFD1-209ENST00000489406 SUSD4Q5VX71 490 aa20.36■□□□□ 0.85
UFD1-209ENST00000489406 OTOP1Q7RTM1 612 aa20.36■□□□□ 0.85
UFD1-209ENST00000489406 COL6A3P12111 3177 aa20.36■□□□□ 0.85
UFD1-209ENST00000489406 CENPFP49454 3210 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 ABCC4O15439 1325 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 MNX1P50219 401 aaPredicted RBP20.35■□□□□ 0.85
UFD1-209ENST00000489406 KIF4BQ2VIQ3 1234 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 PANK3Q9H999 370 aa20.35■□□□□ 0.85
UFD1-209ENST00000489406 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
UFD1-209ENST00000489406 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
UFD1-209ENST00000489406 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
UFD1-209ENST00000489406 BRCA2P51587 3418 aa20.34■□□□□ 0.85
UFD1-209ENST00000489406 CFHR5Q9BXR6 569 aa20.33■□□□□ 0.85
UFD1-209ENST00000489406 RPS12P25398 132 aaKnown RBP20.32■□□□□ 0.84
UFD1-209ENST00000489406 TMEM106CQ9BVX2 250 aa20.32■□□□□ 0.84
UFD1-209ENST00000489406 DBNDD1Q9H9R9 158 aa20.32■□□□□ 0.84
UFD1-209ENST00000489406 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
UFD1-209ENST00000489406 BBOX1O75936 387 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 NTSR2O95665 410 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 SREBF2Q12772 1141 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
UFD1-209ENST00000489406 GAS2L2Q8NHY3 880 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 KCNQ5Q9NR82 932 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
UFD1-209ENST00000489406 ERVV-1B6SEH8 477 aa20.3■□□□□ 0.84
UFD1-209ENST00000489406 ARMC5Q96C12 935 aa20.3■□□□□ 0.84
UFD1-209ENST00000489406 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
UFD1-209ENST00000489406 RANBP2P49792 3224 aaKnown RBP20.29■□□□□ 0.84
UFD1-209ENST00000489406 NUP98P52948 1817 aa20.29■□□□□ 0.84
UFD1-209ENST00000489406 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
UFD1-209ENST00000489406 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
UFD1-209ENST00000489406 SCARF1Q14162 830 aa20.28■□□□□ 0.84
UFD1-209ENST00000489406 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
UFD1-209ENST00000489406 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
UFD1-209ENST00000489406 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
UFD1-209ENST00000489406 WASHC4Q2M389 1173 aa20.27■□□□□ 0.84
UFD1-209ENST00000489406 ZBTB3Q9H5J0 574 aa20.27■□□□□ 0.84
UFD1-209ENST00000489406 SCAF8Q9UPN6 1271 aaKnown RBP20.27■□□□□ 0.84
UFD1-209ENST00000489406 PITPNM2Q9BZ72 1349 aa20.27■□□□□ 0.83
UFD1-209ENST00000489406 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
UFD1-209ENST00000489406 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
UFD1-209ENST00000489406 KIF6Q6ZMV9 814 aa20.26■□□□□ 0.83
UFD1-209ENST00000489406 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
UFD1-209ENST00000489406 DUOX1Q9NRD9 1551 aa20.25■□□□□ 0.83
UFD1-209ENST00000489406 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
UFD1-209ENST00000489406 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
UFD1-209ENST00000489406 ECE2O60344 883 aa20.24■□□□□ 0.83
UFD1-209ENST00000489406 ALDH1A1P00352 501 aa20.24■□□□□ 0.83
UFD1-209ENST00000489406 CD99L2Q8TCZ2 262 aa20.24■□□□□ 0.83
UFD1-209ENST00000489406 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
UFD1-209ENST00000489406 ERO1AQ96HE7 468 aa20.23■□□□□ 0.83
UFD1-209ENST00000489406 SLC4A8Q2Y0W8 1093 aa20.22■□□□□ 0.83
UFD1-209ENST00000489406 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
UFD1-209ENST00000489406 ZNF333Q96JL9 665 aa20.22■□□□□ 0.83
UFD1-209ENST00000489406 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
UFD1-209ENST00000489406 TCIRG1Q13488 830 aa20.21■□□□□ 0.83
UFD1-209ENST00000489406 GRAPQ13588 217 aa20.21■□□□□ 0.83
UFD1-209ENST00000489406 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
UFD1-209ENST00000489406 EFCC1Q9HA90 598 aa20.21■□□□□ 0.83
UFD1-209ENST00000489406 C6orf229H3BNL8 230 aa20.2■□□□□ 0.82
UFD1-209ENST00000489406 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
UFD1-209ENST00000489406 VIL1P09327 827 aaKnown RBP20.2■□□□□ 0.82
UFD1-209ENST00000489406 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
UFD1-209ENST00000489406 DPF3Q92784 378 aa20.2■□□□□ 0.82
UFD1-209ENST00000489406 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
UFD1-209ENST00000489406 NSFL1CQ9UNZ2 370 aaKnown RBP20.2■□□□□ 0.82
UFD1-209ENST00000489406 MYCP01106 439 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms