RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
XRN1-213ENST00000489241 JPH1Q9HDC5 661 aaPredicted RBP7.61□□□□□ -1.19
XRN1-213ENST00000489241 C11orf16Q9NQ32 467 aa7.6□□□□□ -1.19
XRN1-213ENST00000489241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.6□□□□□ -1.192e-7■■■■■ 177.9
XRN1-213ENST00000489241 NAGPAQ9UK23 515 aa7.6□□□□□ -1.19
XRN1-213ENST00000489241 MICAL2O94851 1124 aa7.59□□□□□ -1.19
XRN1-213ENST00000489241 DOC2BQ14184 412 aa7.59□□□□□ -1.19
XRN1-213ENST00000489241 PCSK7Q16549 785 aa7.59□□□□□ -1.19
XRN1-213ENST00000489241 C11orf91Q3C1V1 193 aa7.59□□□□□ -1.19
XRN1-213ENST00000489241 PSAPL1Q6NUJ1 521 aa7.59□□□□□ -1.19
XRN1-213ENST00000489241 NPM2Q86SE8 214 aaKnown RBP7.59□□□□□ -1.19
XRN1-213ENST00000489241 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
XRN1-213ENST00000489241 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
XRN1-213ENST00000489241 TRAPPC3LQ5T215 181 aa7.58□□□□□ -1.2
XRN1-213ENST00000489241 NUDT8Q8WV74 236 aa7.58□□□□□ -1.2
XRN1-213ENST00000489241 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
XRN1-213ENST00000489241 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
XRN1-213ENST00000489241 FKBP5Q13451 457 aaPredicted RBP7.57□□□□□ -1.2
XRN1-213ENST00000489241 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
XRN1-213ENST00000489241 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
XRN1-213ENST00000489241 A0A0A0MRY4 1105 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 RGS9O75916 674 aaPredicted RBP7.56□□□□□ -1.2
XRN1-213ENST00000489241 RARAP10276 462 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 ELNP15502 786 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
XRN1-213ENST00000489241 RAC1P63000 192 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 FAM69CQ0P6D2 419 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 GRIK4Q16099 956 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
XRN1-213ENST00000489241 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 FRRS1LQ9P0K9 344 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
XRN1-213ENST00000489241 C9orf172C9J069 976 aa7.55□□□□□ -1.2
XRN1-213ENST00000489241 GPLD1P80108 840 aa7.55□□□□□ -1.2
XRN1-213ENST00000489241 TRPM4Q8TD43 1214 aa7.55□□□□□ -1.2
XRN1-213ENST00000489241 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
XRN1-213ENST00000489241 PRMT3O60678 531 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 CPB1P15086 417 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
XRN1-213ENST00000489241 OCLNQ16625 522 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 COX20Q5RI15 118 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 TREML1Q86YW5 311 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
XRN1-213ENST00000489241 RTCBQ9Y3I0 505 aaKnown RBP7.54□□□□□ -1.2
XRN1-213ENST00000489241 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 OPLAHO14841 1288 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 SASH3O75995 380 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 EGFRP00533 1210 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 ITGB7P26010 798 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
XRN1-213ENST00000489241 ADGRE1Q14246 886 aa7.53□□□□□ -1.2
XRN1-213ENST00000489241 RSPO4Q2I0M5 234 aaPredicted RBP7.53□□□□□ -1.2
XRN1-213ENST00000489241 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
XRN1-213ENST00000489241 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
XRN1-213ENST00000489241 ZBTB42B2RXF5 422 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 XYLBO75191 536 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 BRD1O95696 1058 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 SELPP16109 830 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 ATP2B4P23634 1241 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 NRLP54845 237 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 MBTPS1Q14703 1052 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 PERM1Q5SV97 790 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 XP32Q5T750 250 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 ILDR2Q71H61 639 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 COL26A1Q96A83 441 aa7.52□□□□□ -1.21
XRN1-213ENST00000489241 PATL2C9JE40 543 aaKnown RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 SSFA2P28290 1259 aa7.51□□□□□ -1.21
XRN1-213ENST00000489241 NRG1Q02297 640 aaPredicted RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 MLLT1Q03111 559 aaPredicted RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 C16orf46Q6P387 395 aa7.51□□□□□ -1.21
XRN1-213ENST00000489241 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
XRN1-213ENST00000489241 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
XRN1-213ENST00000489241 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 CXXC1Q9P0U4 656 aaPredicted RBP7.51□□□□□ -1.21
XRN1-213ENST00000489241 USP20Q9Y2K6 914 aa7.51□□□□□ -1.21
XRN1-213ENST00000489241 GRIK5Q16478 980 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 TXNRD3Q86VQ6 643 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 ETFBKMTQ8IXQ9 262 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 CMTR1Q8N1G2 835 aaKnown RBP7.5□□□□□ -1.21
XRN1-213ENST00000489241 Q8N3U1 123 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 TTC9Q92623 222 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
XRN1-213ENST00000489241 MTMR7Q9Y216 660 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 KCNMB2Q9Y691 235 aa7.5□□□□□ -1.21
XRN1-213ENST00000489241 DYRK3O43781 588 aa7.49□□□□□ -1.21
XRN1-213ENST00000489241 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
XRN1-213ENST00000489241 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
XRN1-213ENST00000489241 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
XRN1-213ENST00000489241 PLAURQ03405 335 aa7.49□□□□□ -1.21
XRN1-213ENST00000489241 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
XRN1-213ENST00000489241 SHISA2Q6UWI4 295 aa7.49□□□□□ -1.21
XRN1-213ENST00000489241 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms