RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 KRT32Q14532 448 aa12.99□□□□□ -0.33
NEB-215ENST00000489048 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
NEB-215ENST00000489048 RESTQ13127 1097 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
NEB-215ENST00000489048 FERMT3Q86UX7 667 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 GTPBP4Q9BZE4 634 aaKnown RBP12.98□□□□□ -0.33
NEB-215ENST00000489048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
NEB-215ENST00000489048 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 PXDNQ92626 1479 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 CAMK4Q16566 473 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
NEB-215ENST00000489048 DDX54Q8TDD1 881 aaKnown RBP12.98□□□□□ -0.33
NEB-215ENST00000489048 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
NEB-215ENST00000489048 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 ATP2B3Q16720 1220 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 SARM1Q6SZW1 724 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 GTF3C6Q969F1 213 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 FSD1Q9BTV5 496 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 DTNBO60941 627 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 TAF5LO75529 589 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 ARID3AQ99856 593 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 ZSCAN16Q9H4T2 348 aaPredicted RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 ZNF589Q86UQ0 364 aaPredicted RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 CCDC8Q9H0W5 538 aaPredicted RBP12.97□□□□□ -0.33
NEB-215ENST00000489048 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
NEB-215ENST00000489048 NR1I2O75469 434 aa12.96□□□□□ -0.33
NEB-215ENST00000489048 KCNA6P17658 529 aa12.96□□□□□ -0.33
NEB-215ENST00000489048 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
NEB-215ENST00000489048 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
NEB-215ENST00000489048 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
NEB-215ENST00000489048 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.34
NEB-215ENST00000489048 FEZ1Q99689 392 aa12.96□□□□□ -0.34
NEB-215ENST00000489048 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.34
NEB-215ENST00000489048 SLIT3O75094 1523 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 ZNF165P49910 485 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
NEB-215ENST00000489048 TRIM5Q9C035 493 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 PAXBP1Q9Y5B6 917 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 COL15A1P39059 1388 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 ATP5JP18859 108 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
NEB-215ENST00000489048 IQCB1Q15051 598 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 PDIA6Q15084 440 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
NEB-215ENST00000489048 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
NEB-215ENST00000489048 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
NEB-215ENST00000489048 NEMFO60524 1076 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 IGKV5-2P06315 115 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 LRMPQ12912 555 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 LTBP4Q8N2S1 1624 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 CTAGE5O15320 804 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 CBX1P83916 185 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 NEK1Q96PY6 1258 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 NRBP1Q9UHY1 535 aa12.94□□□□□ -0.34
NEB-215ENST00000489048 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
NEB-215ENST00000489048 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
NEB-215ENST00000489048 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
NEB-215ENST00000489048 BRF1Q92994 677 aa12.93□□□□□ -0.34
NEB-215ENST00000489048 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
NEB-215ENST00000489048 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
NEB-215ENST00000489048 DRC7Q8IY82 874 aa12.93□□□□□ -0.34
NEB-215ENST00000489048 JAK2O60674 1132 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 TNNT1P13805 278 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
NEB-215ENST00000489048 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
NEB-215ENST00000489048 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
NEB-215ENST00000489048 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
NEB-215ENST00000489048 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 ZNF609O15014 1411 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 STK3Q13188 491 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
NEB-215ENST00000489048 PFKFB2O60825 505 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 RFX5P48382 616 aaPredicted RBP12.91□□□□□ -0.34
NEB-215ENST00000489048 STX1AQ16623 288 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 CCDC144BQ3MJ40 725 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms