RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 TULP4Q9NRJ4 1543 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 VSIG8P0DPA2 414 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-207ENST00000488934 PHTF2Q8N3S3 785 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 PLPP7Q8NBV4 271 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 L3MBTL2Q969R5 705 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 POM121Q96HA1 1249 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 ARHGEF10LQ9HCE6 1279 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 QRICH2Q9H0J4 1663 aa7.27□□□□□ -1.25
SF3A3-207ENST00000488934 ROCK2O75116 1388 aaKnown RBP7.26□□□□□ -1.25
SF3A3-207ENST00000488934 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-207ENST00000488934 CCDC155Q8N6L0 562 aa7.26□□□□□ -1.25
SF3A3-207ENST00000488934 NFATC2IPQ8NCF5 419 aa7.26□□□□□ -1.25
SF3A3-207ENST00000488934 COL22A1Q8NFW1 1626 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-207ENST00000488934 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 SAFB2Q14151 953 aaKnown RBP eCLIP7.25□□□□□ -1.25
SF3A3-207ENST00000488934 EML3Q32P44 896 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 MEX3CQ5U5Q3 659 aaKnown RBP7.25□□□□□ -1.25
SF3A3-207ENST00000488934 PRICKLE2Q7Z3G6 844 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 ORAI2Q96SN7 254 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 SIN3AQ96ST3 1273 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 ESYT1Q9BSJ8 1104 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 CDCA7Q9BWT1 371 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-207ENST00000488934 USP32Q8NFA0 1604 aa7.25□□□□□ -1.25
SF3A3-207ENST00000488934 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 PXDNQ92626 1479 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 PNPLA6Q8IY17 1366 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 WASLO00401 505 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-207ENST00000488934 PSME1Q06323 249 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 CNKSR1Q969H4 720 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 ALG2Q9H553 416 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 TOPAZ1Q8N9V7 1692 aa7.24□□□□□ -1.25
SF3A3-207ENST00000488934 CENPJQ9HC77 1338 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-207ENST00000488934 MARF1Q9Y4F3 1742 aaKnown RBP7.24□□□□□ -1.25
SF3A3-207ENST00000488934 GPRASP1Q5JY77 1395 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 FOXO3O43524 673 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 SKIP12755 728 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 ITGA6P23229 1130 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 GMPRP36959 345 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 WDR44Q5JSH3 913 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 RAB6BQ9NRW1 208 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 ERBB4Q15303 1308 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 ATP7BP35670 1465 aa7.23□□□□□ -1.25
SF3A3-207ENST00000488934 ARHGEF10O15013 1369 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 TNS3Q68CZ2 1445 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 GNASQ5JWF2 1037 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 ZNF772Q68DY9 489 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-207ENST00000488934 SV2AQ7L0J3 742 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 TAS1R3Q7RTX0 852 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
SF3A3-207ENST00000488934 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 GMCL1Q96IK5 515 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 ZSCAN10Q96SZ4 725 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-207ENST00000488934 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-207ENST00000488934 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 NOD1Q9Y239 953 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 LRP6O75581 1613 aa7.22□□□□□ -1.25
SF3A3-207ENST00000488934 SBNO1A3KN83 1393 aa7.21□□□□□ -1.25
SF3A3-207ENST00000488934 SBNO2Q9Y2G9 1366 aa7.21□□□□□ -1.25
SF3A3-207ENST00000488934 CDC14CA4D256 554 aa7.21□□□□□ -1.26
SF3A3-207ENST00000488934 SPATA31C2B4DYI2 1134 aa7.21□□□□□ -1.26
SF3A3-207ENST00000488934 TMEM214Q6NUQ4 689 aaKnown RBP7.21□□□□□ -1.26
SF3A3-207ENST00000488934 FOXR1Q6PIV2 292 aa7.21□□□□□ -1.26
SF3A3-207ENST00000488934 DDX17Q92841 729 aaKnown RBP7.21□□□□□ -1.26
SF3A3-207ENST00000488934 DYRK1BQ9Y463 629 aa7.21□□□□□ -1.26
SF3A3-207ENST00000488934 EVC2Q86UK5 1308 aa7.21□□□□□ -1.26
SF3A3-207ENST00000488934 TRPM3Q9HCF6 1732 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-207ENST00000488934 ALS2Q96Q42 1657 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 A6NJR5 290 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 H7C1W4 665 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 IL2RAP01589 272 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 RHOQP17081 205 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 SRPK2P78362 688 aaKnown RBP7.2□□□□□ -1.26
SF3A3-207ENST00000488934 CENPCQ03188 943 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 NBPF10Q6P3W6 841 aaKnown RBP7.2□□□□□ -1.26
SF3A3-207ENST00000488934 KRT28Q7Z3Y7 464 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 NBPF15Q8N660 670 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 NGDNQ8NEJ9 315 aaKnown RBP7.2□□□□□ -1.26
SF3A3-207ENST00000488934 CARD11Q9BXL7 1154 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 STK17AQ9UEE5 414 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 ABCA3Q99758 1704 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.2□□□□□ -1.26
SF3A3-207ENST00000488934 SPATA31A3Q5VYP0 1347 aa7.2□□□□□ -1.26
SF3A3-207ENST00000488934 BRD4O60885 1362 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-207ENST00000488934 SENP3-EIF4A1A0A087X0R7 540 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 GDF10P55107 478 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 POU4F2Q12837 409 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 TLR1Q15399 786 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 HDGFL1Q5TGJ6 251 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 TRIM50Q86XT4 487 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 CLUAP1Q96AJ1 413 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
SF3A3-207ENST00000488934 CDK19Q9BWU1 502 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 TIMMDC1Q9NPL8 285 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms