RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
SFXN5-219ENST00000488839 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
SFXN5-219ENST00000488839 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
SFXN5-219ENST00000488839 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
SFXN5-219ENST00000488839 RIC3Q7Z5B4 369 aa15.92■□□□□ 0.14
SFXN5-219ENST00000488839 PSMD1Q99460 953 aa15.92■□□□□ 0.14
SFXN5-219ENST00000488839 TMX4Q9H1E5 349 aaPredicted RBP15.92■□□□□ 0.14
SFXN5-219ENST00000488839 BBOX1O75936 387 aa15.91■□□□□ 0.14
SFXN5-219ENST00000488839 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
SFXN5-219ENST00000488839 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
SFXN5-219ENST00000488839 RBM46Q8TBY0 533 aaKnown RBP15.91■□□□□ 0.14
SFXN5-219ENST00000488839 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
SFXN5-219ENST00000488839 VPS33BQ9H267 617 aa15.91■□□□□ 0.14
SFXN5-219ENST00000488839 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
SFXN5-219ENST00000488839 DICER1Q9UPY3 1922 aaKnown RBP15.91■□□□□ 0.14
SFXN5-219ENST00000488839 TNRC6CQ9HCJ0 1690 aaKnown RBP15.9■□□□□ 0.14
SFXN5-219ENST00000488839 ATN1P54259 1190 aaPredicted RBP15.9■□□□□ 0.14
SFXN5-219ENST00000488839 TWISTNBQ3B726 338 aaPredicted RBP15.9■□□□□ 0.14
SFXN5-219ENST00000488839 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
SFXN5-219ENST00000488839 CCDC88AQ3V6T2 1871 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 FSTL1Q12841 308 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 CCDC191Q8NCU4 936 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
SFXN5-219ENST00000488839 PHAXQ9H814 394 aaKnown RBP15.89■□□□□ 0.13
SFXN5-219ENST00000488839 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
SFXN5-219ENST00000488839 CACNA1SQ13698 1873 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 SNED1Q8TER0 1413 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
SFXN5-219ENST00000488839 HSPA6P17066 643 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 SF3B3Q15393 1217 aaKnown RBP15.88■□□□□ 0.13
SFXN5-219ENST00000488839 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
SFXN5-219ENST00000488839 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 KIF12Q96FN5 646 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 SCUBE2Q9NQ36 999 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
SFXN5-219ENST00000488839 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
SFXN5-219ENST00000488839 KSR2Q6VAB6 950 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
SFXN5-219ENST00000488839 METTL22Q9BUU2 404 aaPredicted RBP15.87■□□□□ 0.13
SFXN5-219ENST00000488839 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
SFXN5-219ENST00000488839 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
SFXN5-219ENST00000488839 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
SFXN5-219ENST00000488839 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
SFXN5-219ENST00000488839 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
SFXN5-219ENST00000488839 WDR90Q96KV7 1748 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 FZD9O00144 591 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 VAMP4O75379 141 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 GRAPQ13588 217 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
SFXN5-219ENST00000488839 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
SFXN5-219ENST00000488839 ABCC4O15439 1325 aa15.85■□□□□ 0.13
SFXN5-219ENST00000488839 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
SFXN5-219ENST00000488839 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
SFXN5-219ENST00000488839 IRS4O14654 1257 aaPredicted RBP15.84■□□□□ 0.13
SFXN5-219ENST00000488839 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
SFXN5-219ENST00000488839 NEXNQ0ZGT2 675 aa15.84■□□□□ 0.13
SFXN5-219ENST00000488839 SMC1BQ8NDV3 1235 aa15.84■□□□□ 0.13
SFXN5-219ENST00000488839 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
SFXN5-219ENST00000488839 MYD88Q99836 296 aa15.84■□□□□ 0.13
SFXN5-219ENST00000488839 RTFDC1Q9BY42 306 aaPredicted RBP15.84■□□□□ 0.13
SFXN5-219ENST00000488839 ZNF277Q9NRM2 450 aaPredicted RBP15.84■□□□□ 0.13
SFXN5-219ENST00000488839 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 POTECB2RU33 542 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 APLP1P51693 650 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 MAP3K2Q9Y2U5 619 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.12
SFXN5-219ENST00000488839 CACNA1FO60840 1977 aa15.83■□□□□ 0.12
SFXN5-219ENST00000488839 EXOSC9Q06265 439 aaKnown RBP15.82■□□□□ 0.12
SFXN5-219ENST00000488839 ZNF521Q96K83 1311 aa15.82■□□□□ 0.12
SFXN5-219ENST00000488839 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
SFXN5-219ENST00000488839 PDE8AO60658 829 aa15.81■□□□□ 0.12
SFXN5-219ENST00000488839 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
SFXN5-219ENST00000488839 LAMB2P55268 1798 aa15.81■□□□□ 0.12
SFXN5-219ENST00000488839 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
SFXN5-219ENST00000488839 GPC2Q8N158 579 aa15.81■□□□□ 0.12
SFXN5-219ENST00000488839 MPNDQ8N594 471 aa15.81■□□□□ 0.12
SFXN5-219ENST00000488839 BMP2KQ9NSY1 1161 aaPredicted RBP15.81■□□□□ 0.12
SFXN5-219ENST00000488839 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
SFXN5-219ENST00000488839 FLIIQ13045 1269 aa15.8■□□□□ 0.12
SFXN5-219ENST00000488839 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
SFXN5-219ENST00000488839 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
SFXN5-219ENST00000488839 LARGE2Q8N3Y3 721 aa15.8■□□□□ 0.12
SFXN5-219ENST00000488839 RPS8P62241 208 aaKnown RBP15.79■□□□□ 0.12
SFXN5-219ENST00000488839 LCE2DQ5TA82 110 aaPredicted RBP15.79■□□□□ 0.12
SFXN5-219ENST00000488839 FAM163AQ96GL9 167 aaPredicted RBP15.79■□□□□ 0.12
SFXN5-219ENST00000488839 SCN4AP35499 1836 aa15.78■□□□□ 0.12
SFXN5-219ENST00000488839 TCERG1O14776 1098 aaKnown RBP15.78■□□□□ 0.12
SFXN5-219ENST00000488839 IGKV5-2P06315 115 aa15.78■□□□□ 0.12
SFXN5-219ENST00000488839 FKBP5Q13451 457 aaPredicted RBP15.78■□□□□ 0.12
SFXN5-219ENST00000488839 G2E3Q7L622 706 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms