RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 GNL2Q13823 731 aaKnown RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 CCDC144BQ3MJ40 725 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 MEI1Q5TIA1 1274 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 USP48Q86UV5 1035 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 RHPN1Q8TCX5 695 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 AIDAQ96BJ3 306 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 HSH2DQ96JZ2 352 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 C12orf49Q9H741 205 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 ZFYVE28Q9HCC9 887 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 CUEDC1Q9NWM3 386 aaPredicted RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 CDK11AQ9UQ88 783 aaPredicted RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 RUSC2Q8N2Y8 1516 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 PRG4Q92954 1404 aaPredicted RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 J3QL48 77 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 TIMP2P16035 220 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 GTF2E1P29083 439 aaPredicted RBP4.94□□□□□ -1.62
GPNMB-212ENST00000487890 PHKA2P46019 1235 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 ARID5AQ03989 594 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 RBL2Q08999 1139 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 GNASQ5JWF2 1037 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 SLC27A3Q5K4L6 730 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 SPRYD7Q5W111 196 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 XKR5Q6UX68 686 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 CMTR1Q8N1G2 835 aaKnown RBP4.94□□□□□ -1.62
GPNMB-212ENST00000487890 PKD2L1Q9P0L9 805 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 GGT7Q9UJ14 662 aa4.94□□□□□ -1.62
GPNMB-212ENST00000487890 V9GY48 417 aaPredicted RBP4.94□□□□□ -1.62
GPNMB-212ENST00000487890 GIPC1O14908 333 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 TSPOAP1O95153 1857 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 POLR3DP05423 398 aaPredicted RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 USP17L7P0C7H9 530 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 INPP5BP32019 993 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 GPC1P35052 558 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 RNF144AP50876 292 aaPredicted RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 TAF1CQ15572 869 aaPredicted RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 TRIP4Q15650 581 aaPredicted RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 NXPE4Q6UWF7 544 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 HS2ST1Q7LGA3 356 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 SPNS2Q8IVW8 549 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 SNIP1Q8TAD8 396 aaKnown RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 PMFBP1Q8TBY8 1022 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 ARMC5Q96C12 935 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 INSM2Q96T92 566 aaPredicted RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 ELP3Q9H9T3 547 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 COPRSQ9NQ92 184 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 RTCBQ9Y3I0 505 aaKnown RBP4.93□□□□□ -1.62
GPNMB-212ENST00000487890 KCNMB2Q9Y691 235 aa4.93□□□□□ -1.62
GPNMB-212ENST00000487890 UBAP1LF5GYI3 381 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 GRNP28799 593 aaKnown RBP4.92□□□□□ -1.62
GPNMB-212ENST00000487890 ARSDP51689 593 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 HIF1AQ16665 826 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 ZNF697Q5TEC3 545 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 IER5Q5VY09 327 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 ZNF662Q6ZS27 426 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 ZNF438Q7Z4V0 828 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 NOP9Q86U38 636 aaKnown RBP4.92□□□□□ -1.62
GPNMB-212ENST00000487890 MCF2L2Q86YR7 1114 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 SNX29Q8TEQ0 813 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 PIF1Q9H611 641 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 ZDHHC3Q9NYG2 299 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 TMEM63CQ9P1W3 806 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 KIF13AQ9H1H9 1805 aa4.92□□□□□ -1.62
GPNMB-212ENST00000487890 IGF1RP08069 1367 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 CARMIL1Q5VZK9 1371 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 SPATA31C2B4DYI2 1134 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 PPM1GO15355 546 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-212ENST00000487890 PHACTR2O75167 634 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 CTSOP43234 321 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-212ENST00000487890 GJA8P48165 433 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 POU4F2Q12837 409 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 PAK2Q13177 524 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 NBPF1Q3BBV0 1214 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 PDE12Q6L8Q7 609 aaKnown RBP4.91□□□□□ -1.62
GPNMB-212ENST00000487890 BICDL1Q6ZP65 573 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 ERMP1Q7Z2K6 904 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 BTLAQ7Z6A9 289 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 ZNF598Q86UK7 904 aaKnown RBP4.91□□□□□ -1.62
GPNMB-212ENST00000487890 VPS37DQ86XT2 251 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 MEIOBQ8N635 442 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 ZIC5Q96T25 663 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 BCO2Q9BYV7 579 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 CHRDQ9H2X0 955 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 NPHS2Q9NP85 383 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 CNTN3Q9P232 1028 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 FAM8A1Q9UBU6 413 aa4.91□□□□□ -1.62
GPNMB-212ENST00000487890 FNDC3AQ9Y2H6 1198 aaKnown RBP4.91□□□□□ -1.62
GPNMB-212ENST00000487890 ADCY10Q96PN6 1610 aa4.9□□□□□ -1.62
GPNMB-212ENST00000487890 TLDC2A0PJX2 215 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 EREGO14944 169 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 GADD45BO75293 160 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-212ENST00000487890 FGRP09769 529 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 TATP17735 454 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-212ENST00000487890 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-212ENST00000487890 ATP4AP20648 1035 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 ST13P50502 369 aaKnown RBP4.9□□□□□ -1.63
GPNMB-212ENST00000487890 MMRN1Q13201 1228 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 LRRC69Q6ZNQ3 347 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 GALNT12Q8IXK2 581 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 C1orf127Q8N9H9 656 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 ANKIB1Q9P2G1 1089 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms