RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
HOXA9-204ENST00000487384 ABCC4O15439 1325 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 ANKRD36CQ5JPF3 1778 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 HIRAP54198 1017 aaPredicted RBP11.11□□□□□ -0.63
HOXA9-204ENST00000487384 DGKZQ13574 1117 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
HOXA9-204ENST00000487384 PPP1R42Q7Z4L9 355 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
HOXA9-204ENST00000487384 CA12O43570 354 aa11.1□□□□□ -0.63
HOXA9-204ENST00000487384 ANXA1P04083 346 aa11.1□□□□□ -0.63
HOXA9-204ENST00000487384 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
HOXA9-204ENST00000487384 DPP8Q6V1X1 898 aaPredicted RBP11.1□□□□□ -0.63
HOXA9-204ENST00000487384 NEFMP07197 916 aa11.09□□□□□ -0.63
HOXA9-204ENST00000487384 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
HOXA9-204ENST00000487384 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
HOXA9-204ENST00000487384 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
HOXA9-204ENST00000487384 MPNDQ8N594 471 aa11.09□□□□□ -0.63
HOXA9-204ENST00000487384 SUPT20HQ8NEM7 779 aa11.09□□□□□ -0.63
HOXA9-204ENST00000487384 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
HOXA9-204ENST00000487384 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
HOXA9-204ENST00000487384 YDJCA8MPS7 323 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 HUNKP57058 714 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 KIAA2012Q0VF49 1180 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 PROSER3Q2NL68 480 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 PARP10Q53GL7 1025 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 RTFDC1Q9BY42 306 aaPredicted RBP11.08□□□□□ -0.64
HOXA9-204ENST00000487384 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 PGAP2Q9UHJ9 254 aa11.08□□□□□ -0.64
HOXA9-204ENST00000487384 CNOT7Q9UIV1 285 aaKnown RBP11.08□□□□□ -0.64
HOXA9-204ENST00000487384 H7C1D1 291 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 BBOX1O75936 387 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 TNIP1Q15025 636 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 SLC10A5Q5PT55 438 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 SP8Q8IXZ3 490 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
HOXA9-204ENST00000487384 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
HOXA9-204ENST00000487384 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
HOXA9-204ENST00000487384 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
HOXA9-204ENST00000487384 NOGQ13253 232 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 PDIA6Q15084 440 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
HOXA9-204ENST00000487384 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 DUOX1Q9NRD9 1551 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
HOXA9-204ENST00000487384 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
HOXA9-204ENST00000487384 PSMD14O00487 310 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 EGFRP00533 1210 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 SOX10P56693 466 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 TBC1D10BQ4KMP7 808 aaPredicted RBP11.05□□□□□ -0.64
HOXA9-204ENST00000487384 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
HOXA9-204ENST00000487384 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 NLRP10Q86W26 655 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 TRMT112Q9UI30 125 aaKnown RBP11.05□□□□□ -0.64
HOXA9-204ENST00000487384 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
HOXA9-204ENST00000487384 LRRC37AA6NMS7 1700 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 GRAPQ13588 217 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 RGMBQ6NW40 437 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
HOXA9-204ENST00000487384 COPS6Q7L5N1 327 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
HOXA9-204ENST00000487384 XAGE3Q8WTP9 111 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 MAPK8IP3Q9UPT6 1336 aa11.04□□□□□ -0.64
HOXA9-204ENST00000487384 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
HOXA9-204ENST00000487384 TRPA1O75762 1119 aa11.03□□□□□ -0.64
HOXA9-204ENST00000487384 ZNF157P51786 506 aaPredicted RBP11.03□□□□□ -0.64
HOXA9-204ENST00000487384 KIF23Q02241 960 aaPredicted RBP11.03□□□□□ -0.64
HOXA9-204ENST00000487384 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
HOXA9-204ENST00000487384 GBA2Q9HCG7 927 aaPredicted RBP11.03□□□□□ -0.64
HOXA9-204ENST00000487384 KCNQ5Q9NR82 932 aa11.03□□□□□ -0.64
HOXA9-204ENST00000487384 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
HOXA9-204ENST00000487384 COL4A1P02462 1669 aa11.03□□□□□ -0.64
HOXA9-204ENST00000487384 SH3TC1Q8TE82 1336 aa11.03□□□□□ -0.64
HOXA9-204ENST00000487384 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
HOXA9-204ENST00000487384 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 CENPFP49454 3210 aa11.02□□□□□ -0.65
HOXA9-204ENST00000487384 MKI67P46013 3256 aaKnown RBP11.01□□□□□ -0.65
HOXA9-204ENST00000487384 ECE2O60344 883 aa11.01□□□□□ -0.65
HOXA9-204ENST00000487384 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
HOXA9-204ENST00000487384 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms