RNA–Protein interactions for RNA: ENST00000487299.5

DPPA4-206, Transcript of developmental pluripotency associated 4, humanhuman

TSL 2

Gene DPPA4, Length 731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-206ENST00000487299 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
DPPA4-206ENST00000487299 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
DPPA4-206ENST00000487299 KRT24Q2M2I5 525 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 GPC2Q8N158 579 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 RPGRQ92834 1020 aaKnown RBP12.85□□□□□ -0.35
DPPA4-206ENST00000487299 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
DPPA4-206ENST00000487299 MAPK8IP3Q9UPT6 1336 aa12.85□□□□□ -0.35
DPPA4-206ENST00000487299 LAMB2P55268 1798 aa12.84□□□□□ -0.35
DPPA4-206ENST00000487299 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
DPPA4-206ENST00000487299 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
DPPA4-206ENST00000487299 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
DPPA4-206ENST00000487299 ABCC4O15439 1325 aa12.84□□□□□ -0.35
DPPA4-206ENST00000487299 COL4A1P02462 1669 aa12.83□□□□□ -0.35
DPPA4-206ENST00000487299 NEFMP07197 916 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
DPPA4-206ENST00000487299 EPS15P42566 896 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 RIPK4P57078 832 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
DPPA4-206ENST00000487299 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
DPPA4-206ENST00000487299 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
DPPA4-206ENST00000487299 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
DPPA4-206ENST00000487299 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
DPPA4-206ENST00000487299 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 SEC24BO95487 1268 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
DPPA4-206ENST00000487299 AOC3Q16853 763 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 PNMA8AQ86V59 439 aaPredicted RBP12.81□□□□□ -0.36
DPPA4-206ENST00000487299 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
DPPA4-206ENST00000487299 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
DPPA4-206ENST00000487299 THSD7BQ9C0I4 1608 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 TAF1P21675 1872 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 TRAF5O00463 557 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
DPPA4-206ENST00000487299 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 RTFDC1Q9BY42 306 aaPredicted RBP12.8□□□□□ -0.36
DPPA4-206ENST00000487299 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
DPPA4-206ENST00000487299 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
DPPA4-206ENST00000487299 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
DPPA4-206ENST00000487299 CXCL9Q07325 125 aa12.79□□□□□ -0.36
DPPA4-206ENST00000487299 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
DPPA4-206ENST00000487299 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
DPPA4-206ENST00000487299 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
DPPA4-206ENST00000487299 CHL1O00533 1208 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 RALBP1Q15311 655 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 DEFB115Q30KQ5 88 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 CST9Q5W186 159 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 NIM1KQ8IY84 436 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
DPPA4-206ENST00000487299 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
DPPA4-206ENST00000487299 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
DPPA4-206ENST00000487299 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
DPPA4-206ENST00000487299 LBX1P52954 281 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 IER5LQ5T953 404 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
DPPA4-206ENST00000487299 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 HIRAP54198 1017 aaPredicted RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 GRAPQ13588 217 aa12.76□□□□□ -0.37
DPPA4-206ENST00000487299 USP50Q70EL3 339 aaPredicted RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
DPPA4-206ENST00000487299 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 ZNRF3Q9ULT6 936 aa12.76□□□□□ -0.37
DPPA4-206ENST00000487299 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
DPPA4-206ENST00000487299 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 KIAA2012Q0VF49 1180 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 HSP90AB3PQ58FF7 597 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 DPP8Q6V1X1 898 aaPredicted RBP12.75□□□□□ -0.37
DPPA4-206ENST00000487299 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 SH3TC1Q8TE82 1336 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 TRPM7Q96QT4 1865 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
DPPA4-206ENST00000487299 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
DPPA4-206ENST00000487299 ADARB2Q9NS39 739 aaKnown RBP12.75□□□□□ -0.37
DPPA4-206ENST00000487299 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
DPPA4-206ENST00000487299 BBOX1O75936 387 aa12.74□□□□□ -0.37
DPPA4-206ENST00000487299 RAD17O75943 681 aa12.74□□□□□ -0.37
DPPA4-206ENST00000487299 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms