RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 KIF6Q6ZMV9 814 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 ZNF652Q9Y2D9 606 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 SLX4Q8IY92 1834 aa9.3□□□□□ -0.92
UBE4B-209ENST00000487244 LAMB2P55268 1798 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 ERVV-1B6SEH8 477 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 SLC34A2O95436 690 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 HOXB7P09629 217 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 GPTP24298 496 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 AIMP1Q12904 312 aaKnown RBP9.29□□□□□ -0.92
UBE4B-209ENST00000487244 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 NBPF5PQ86XG9 351 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-209ENST00000487244 C2CD5Q86YS7 1000 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 DDX27Q96GQ7 796 aaKnown RBP9.29□□□□□ -0.92
UBE4B-209ENST00000487244 DDX21Q9NR30 783 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBE4B-209ENST00000487244 CCDC88AQ3V6T2 1871 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 FANCIQ9NVI1 1328 aa9.29□□□□□ -0.92
UBE4B-209ENST00000487244 NPHP1O15259 732 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 GRIN3BO60391 1043 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 GPR153Q6NV75 609 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
UBE4B-209ENST00000487244 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 BRIP1Q9BX63 1249 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
UBE4B-209ENST00000487244 TCERG1O14776 1098 aaKnown RBP9.27□□□□□ -0.93
UBE4B-209ENST00000487244 ST5P78524 1137 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 DALRD3Q5D0E6 543 aaKnown RBP9.27□□□□□ -0.93
UBE4B-209ENST00000487244 SUSD4Q5VX71 490 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 ZNF34Q8IZ26 560 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.93
UBE4B-209ENST00000487244 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-209ENST00000487244 DDX60Q8IY21 1712 aaKnown RBP9.27□□□□□ -0.93
UBE4B-209ENST00000487244 TAF1P21675 1872 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 FER1L6Q2WGJ9 1857 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 IL16Q14005 1332 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 ZNF521Q96K83 1311 aa9.27□□□□□ -0.93
UBE4B-209ENST00000487244 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 ADCY9O60503 1353 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 H0YIN7 160 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 TBC1D12O60347 775 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 NTSR2O95665 410 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
UBE4B-209ENST00000487244 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-209ENST00000487244 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-209ENST00000487244 SRGNP10124 158 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 PDE6BP35913 854 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 RASSF7Q02833 373 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 MFSD10Q14728 455 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 DIEXFQ68CQ4 756 aaKnown RBP9.25□□□□□ -0.93
UBE4B-209ENST00000487244 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 WDR63Q8IWG1 891 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 SYNE4Q8N205 404 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 TTLL6Q8N841 843 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.93
UBE4B-209ENST00000487244 HYPKQ9NX55 129 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
UBE4B-209ENST00000487244 KLRG2A4D1S0 409 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-209ENST00000487244 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
UBE4B-209ENST00000487244 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
UBE4B-209ENST00000487244 PRELPP51888 382 aa9.24□□□□□ -0.93
UBE4B-209ENST00000487244 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
UBE4B-209ENST00000487244 TWISTNBQ3B726 338 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-209ENST00000487244 NLRP10Q86W26 655 aa9.24□□□□□ -0.93
UBE4B-209ENST00000487244 PLBD2Q8NHP8 589 aa9.24□□□□□ -0.93
UBE4B-209ENST00000487244 PTCD2Q8WV60 388 aaKnown RBP9.24□□□□□ -0.93
UBE4B-209ENST00000487244 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBE4B-209ENST00000487244 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 COL4A1P02462 1669 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 DICER1Q9UPY3 1922 aaKnown RBP9.23□□□□□ -0.93
UBE4B-209ENST00000487244 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 C21orf2O43822 256 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-209ENST00000487244 TCIRG1Q13488 830 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 CCDC30Q5VVM6 783 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 STYK1Q6J9G0 422 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 PRPF40BQ6NWY9 871 aaKnown RBP9.23□□□□□ -0.93
UBE4B-209ENST00000487244 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 G2E3Q7L622 706 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 NYXQ9GZU5 481 aa9.23□□□□□ -0.93
UBE4B-209ENST00000487244 NFKBIEO00221 500 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 NPR1P16066 1061 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 PLCB2Q00722 1185 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 CRY2Q49AN0 593 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 PARP10Q53GL7 1025 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-209ENST00000487244 MASTLQ96GX5 879 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 ISCA1Q9BUE6 129 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 UTP14AQ9BVJ6 771 aaKnown RBP9.22□□□□□ -0.93
UBE4B-209ENST00000487244 WDR70Q9NW82 654 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
UBE4B-209ENST00000487244 VAMP4O75379 141 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms