RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 POTEIP0CG38 1075 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 BDNFP23560 247 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 COPB2P35606 906 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 DGKZQ13574 1117 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 PLEKHG6Q3KR16 790 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 SMIM5Q71RC9 77 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 NLGN1Q8N2Q7 840 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 IRF2BPLQ9H1B7 796 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 TMX4Q9H1E5 349 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 PRR36Q9H6K5 1346 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 BRD4O60885 1362 aaPredicted RBP6.98□□□□□ -1.29
SF1-217ENST00000486960 RGPD5Q99666 1765 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 TTC28Q96AY4 2481 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 SCAMP3O14828 347 aaKnown RBP6.98□□□□□ -1.29
SF1-217ENST00000486960 HSD3B2P26439 372 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 TBX4P57082 545 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 HIC1Q14526 733 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 DDB1Q16531 1140 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 CDCA8Q53HL2 280 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 ARHGAP27Q6ZUM4 889 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 SNX27Q96L92 541 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 REPIN1Q9BWE0 567 aaKnown RBP6.98□□□□□ -1.29
SF1-217ENST00000486960 ZSWIM4Q9H7M6 989 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 SPC25Q9HBM1 224 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 RRP7BPQ9NSQ0 103 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
SF1-217ENST00000486960 G3BP2Q9UN86 482 aaKnown RBP6.98□□□□□ -1.29
SF1-217ENST00000486960 TAF1LQ8IZX4 1826 aa6.98□□□□□ -1.29
SF1-217ENST00000486960 EPB41L2O43491 1005 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 PRC1O43663 620 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 C7P10643 843 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 PPP4CP60510 307 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 WAPLQ7Z5K2 1190 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 TMC2Q8TDI7 906 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 NAP1L4Q99733 375 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 PCGF6Q9BYE7 350 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 PIF1Q9H611 641 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 PCDH12Q9NPG4 1184 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 GEMIN8Q9NWZ8 242 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 TFCP2L1Q9NZI6 479 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 PCDHB8Q9UN66 801 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 TBC1D2BQ9UPU7 963 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 THRAP3Q9Y2W1 955 aaKnown RBP6.97□□□□□ -1.29
SF1-217ENST00000486960 PPLO60437 1756 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 PASKQ96RG2 1323 aa6.97□□□□□ -1.29
SF1-217ENST00000486960 CCDC189A1A4V9 331 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 CLCN1P35523 988 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 DEKP35659 375 aaKnown RBP6.96□□□□□ -1.3
SF1-217ENST00000486960 FMNL3Q8IVF7 1028 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 ANP32EQ9BTT0 268 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 TCEAL9Q9UHQ7 104 aa6.96□□□□□ -1.3
SF1-217ENST00000486960 FCHSD2O94868 740 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 EVA1CP58658 441 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
SF1-217ENST00000486960 WASHC4Q2M389 1173 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 FBXO33Q7Z6M2 555 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 FILIP1Q7Z7B0 1213 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 IFNL1Q8IU54 200 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 BEGAINQ9BUH8 593 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 BACH2Q9BYV9 841 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 CRISPLD2Q9H0B8 497 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 ARHGEF10LQ9HCE6 1279 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 RNF181Q9P0P0 153 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 PRR12Q9ULL5 1215 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 BCS1LQ9Y276 419 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 FRMD4BQ9Y2L6 1034 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 C5P01031 1676 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 UBR3Q6ZT12 1888 aa6.95□□□□□ -1.3
SF1-217ENST00000486960 USP6P35125 1406 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 CRB1P82279 1406 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 VEGFAP15692 232 aaPredicted RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 COL9A1P20849 921 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 FECHP22830 423 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 SSFA2P28290 1259 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 CLK2P49760 499 aaKnown RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 NLRP6P59044 892 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 LMOD3Q0VAK6 560 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 PCGF5Q86SE9 256 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 NBPF11Q86T75 865 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 PRDM6Q9NQX0 595 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 IFT57Q9NWB7 429 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 TFIP11Q9UBB9 837 aaKnown RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 ERBB3P21860 1342 aa6.94□□□□□ -1.3
SF1-217ENST00000486960 WDR33Q9C0J8 1336 aaKnown RBP6.94□□□□□ -1.3
SF1-217ENST00000486960 POU5F1Q01860 360 aaKnown RBP6.93□□□□□ -1.3
SF1-217ENST00000486960 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
SF1-217ENST00000486960 MAP2K1Q02750 393 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms