RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PSMA5P28066 241 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 TMEM87AQ8NBN3 555 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 RBSNQ9H1K0 784 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 RFX7Q2KHR2 1363 aa21.55■■□□□ 1.04
PDLIM7-207ENST00000486828 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-207ENST00000486828 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-207ENST00000486828 CLCN1P35523 988 aa21.54■■□□□ 1.04
PDLIM7-207ENST00000486828 NUTM2AQ8IVF1 878 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-207ENST00000486828 FOXO4P98177 505 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 LMBR1LQ6UX01 489 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 CCDC83Q8IWF9 413 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 CARD10Q9BWT7 1032 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 IL2RBP14784 551 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 USP48Q86UV5 1035 aa21.53■■□□□ 1.04
PDLIM7-207ENST00000486828 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 SYCE3A1L190 88 aa21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 ESPNB1AK53 854 aa21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 ZNF589Q86UQ0 364 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 SYAP1Q96A49 352 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 EDC3Q96F86 508 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-207ENST00000486828 TJP1Q07157 1748 aa21.52■■□□□ 1.03
PDLIM7-207ENST00000486828 ADAMTS2O95450 1211 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 FOXD4L6Q3SYB3 417 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 FOXD4L3Q6VB84 417 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 HMG20BQ9P0W2 317 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 TNS2Q63HR2 1409 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 F13A1P00488 732 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 GJB2P29033 226 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 ME3Q16798 604 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 GDPD2Q9HCC8 539 aa21.51■■□□□ 1.03
PDLIM7-207ENST00000486828 SPATA31A6Q5VVP1 1343 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 TAF5LO75529 589 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 A1BGP04217 495 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 ST3GAL1Q11201 340 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 TSGA10IPQ3SY00 556 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 DDX54Q8TDD1 881 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 HAUS7Q99871 368 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 ALDH8A1Q9H2A2 487 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 ATP6V1DQ9Y5K8 247 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 LRP6O75581 1613 aa21.5■■□□□ 1.03
PDLIM7-207ENST00000486828 GADD45BO75293 160 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 USPL1Q5W0Q7 1092 aa21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 BLOC1S2Q6QNY1 142 aa21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 CCDC191Q8NCU4 936 aa21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
PDLIM7-207ENST00000486828 RPS6KB1P23443 525 aa21.48■■□□□ 1.03
PDLIM7-207ENST00000486828 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
PDLIM7-207ENST00000486828 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
PDLIM7-207ENST00000486828 DNAJC2Q99543 621 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-207ENST00000486828 GPR108Q9NPR9 543 aa21.47■■□□□ 1.03
PDLIM7-207ENST00000486828 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
PDLIM7-207ENST00000486828 ATG9AQ7Z3C6 839 aa21.47■■□□□ 1.03
PDLIM7-207ENST00000486828 UBE2Q2Q8WVN8 375 aa21.47■■□□□ 1.03
PDLIM7-207ENST00000486828 ZNF609O15014 1411 aa21.46■■□□□ 1.03
PDLIM7-207ENST00000486828 TCHHQ07283 1943 aa21.46■■□□□ 1.03
PDLIM7-207ENST00000486828 PHF14O94880 888 aa21.46■■□□□ 1.03
PDLIM7-207ENST00000486828 ZBTB3Q9H5J0 574 aa21.46■■□□□ 1.03
PDLIM7-207ENST00000486828 TAF6LQ9Y6J9 622 aa21.46■■□□□ 1.03
PDLIM7-207ENST00000486828 PDIA4P13667 645 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 COL9A3Q14050 684 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 KRT32Q14532 448 aa21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 NECAB1Q8N987 351 aa21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 NDUFB9Q9Y6M9 179 aa21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 COL14A1Q05707 1796 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 IL15P40933 162 aaPredicted RBP21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 BTG4Q9NY30 223 aa21.45■■□□□ 1.02
PDLIM7-207ENST00000486828 KBTBD3Q8NAB2 608 aa21.44■■□□□ 1.02
PDLIM7-207ENST00000486828 PDLIM2Q96JY6 352 aa21.44■■□□□ 1.02
PDLIM7-207ENST00000486828 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-207ENST00000486828 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
PDLIM7-207ENST00000486828 PALLDQ8WX93 1383 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 EVA1CP58658 441 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 UBE2HP62256 183 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 MCMDC2Q4G0Z9 681 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 TSPY26PQ9H489 355 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 ATG3Q9NT62 314 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 DDX46Q7L014 1031 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 TICAM2Q86XR7 235 aa21.43■■□□□ 1.02
PDLIM7-207ENST00000486828 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
PDLIM7-207ENST00000486828 EYA2O00167 538 aa21.42■■□□□ 1.02
PDLIM7-207ENST00000486828 CIAO1O76071 339 aa21.42■■□□□ 1.02
PDLIM7-207ENST00000486828 TCEANC2Q96MN5 208 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 NEUROD6Q96NK8 337 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 ISCA1Q9BUE6 129 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 HS1BP3Q53T59 392 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 CCDC183Q5T5S1 534 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 CCDC129Q6ZRS4 1044 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 SEC62Q99442 399 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
PDLIM7-207ENST00000486828 VPS37CA5D8V6 355 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 FIBPO43427 364 aa21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 CHGBP05060 677 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms