RNA–Protein interactions for RNA: ENST00000486408.5

PHF20-213, Transcript of PHD finger protein 20, humanhuman

TSL 5

Gene PHF20, Length 809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-213ENST00000486408 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 SNX29Q8TEQ0 813 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 GTPBP3Q969Y2 492 aaKnown RBP8.33□□□□□ -1.08
PHF20-213ENST00000486408 ABHD17AQ96GS6 310 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
PHF20-213ENST00000486408 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
PHF20-213ENST00000486408 GRIN2CQ14957 1233 aa8.32□□□□□ -1.08
PHF20-213ENST00000486408 MRRFQ96E11 262 aaKnown RBP8.32□□□□□ -1.08
PHF20-213ENST00000486408 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
PHF20-213ENST00000486408 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
PHF20-213ENST00000486408 CPNE3O75131 537 aaKnown RBP8.31□□□□□ -1.08
PHF20-213ENST00000486408 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 VWA5B2Q8N398 1253 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 ABI2Q9NYB9 513 aaPredicted RBP8.31□□□□□ -1.08
PHF20-213ENST00000486408 CNTN3Q9P232 1028 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 ZFATQ9P243 1243 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
PHF20-213ENST00000486408 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
PHF20-213ENST00000486408 SASH3O75995 380 aa8.3□□□□□ -1.08
PHF20-213ENST00000486408 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
PHF20-213ENST00000486408 MRPL58Q14197 206 aaKnown RBP8.3□□□□□ -1.08
PHF20-213ENST00000486408 C1orf127Q8N9H9 656 aa8.3□□□□□ -1.08
PHF20-213ENST00000486408 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
PHF20-213ENST00000486408 DUSP9Q99956 384 aaKnown RBP8.3□□□□□ -1.08
PHF20-213ENST00000486408 MAP3K6O95382 1288 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 CD33P20138 364 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 FGFR3P22607 806 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 VEGFBP49765 207 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 DAB2P98082 770 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 USPL1Q5W0Q7 1092 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 IGSF5Q9NSI5 407 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 RNF19AQ9NV58 838 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 PARP2Q9UGN5 583 aa8.29□□□□□ -1.08
PHF20-213ENST00000486408 MMP20O60882 483 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 PHACTR2O75167 634 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 HOXD8P13378 290 aaPredicted RBP8.28□□□□□ -1.08
PHF20-213ENST00000486408 OR13H1Q8NG92 308 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 SLC16A10Q8TF71 515 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 PMEPA1Q969W9 287 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 CCDC74AQ96AQ1 378 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 TRERF1Q96PN7 1200 aa8.28□□□□□ -1.08
PHF20-213ENST00000486408 CDC14CA4D256 554 aa8.27□□□□□ -1.09
PHF20-213ENST00000486408 CTBSQ01459 385 aa8.27□□□□□ -1.09
PHF20-213ENST00000486408 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
PHF20-213ENST00000486408 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
PHF20-213ENST00000486408 GALNT12Q8IXK2 581 aa8.27□□□□□ -1.09
PHF20-213ENST00000486408 FRMD6Q96NE9 622 aa8.27□□□□□ -1.09
PHF20-213ENST00000486408 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
PHF20-213ENST00000486408 GPR25O00155 361 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 C2CD2LO14523 706 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 EREGO14944 169 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 WIPF1O43516 503 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 GNA15P30679 374 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 SOX18P35713 384 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 TLR7Q9NYK1 1049 aaKnown RBP8.26□□□□□ -1.09
PHF20-213ENST00000486408 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
PHF20-213ENST00000486408 H3BM21 787 aa8.25□□□□□ -1.09
PHF20-213ENST00000486408 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
PHF20-213ENST00000486408 RARAP10276 462 aa8.25□□□□□ -1.09
PHF20-213ENST00000486408 NFKB1P19838 968 aa8.25□□□□□ -1.09
PHF20-213ENST00000486408 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
PHF20-213ENST00000486408 LDLRAD1Q5T700 205 aa8.25□□□□□ -1.09
PHF20-213ENST00000486408 KRT25Q7Z3Z0 450 aa8.25□□□□□ -1.09
PHF20-213ENST00000486408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
PHF20-213ENST00000486408 KIF4AO95239 1232 aa8.24□□□□□ -1.09
PHF20-213ENST00000486408 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
PHF20-213ENST00000486408 CES1P23141 567 aa8.24□□□□□ -1.09
PHF20-213ENST00000486408 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
PHF20-213ENST00000486408 GAS6Q14393 721 aa8.24□□□□□ -1.09
PHF20-213ENST00000486408 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
PHF20-213ENST00000486408 EPS8L3Q8TE67 593 aaKnown RBP8.24□□□□□ -1.09
PHF20-213ENST00000486408 RECKO95980 971 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
PHF20-213ENST00000486408 IRS1P35568 1242 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.23□□□□□ -1.09
PHF20-213ENST00000486408 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 BHMTQ93088 406 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 PNMA5Q96PV4 448 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
PHF20-213ENST00000486408 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 AK5Q9Y6K8 562 aa8.23□□□□□ -1.09
PHF20-213ENST00000486408 GIPC1O14908 333 aa8.22□□□□□ -1.09
PHF20-213ENST00000486408 PSAPP07602 524 aa8.22□□□□□ -1.09
PHF20-213ENST00000486408 NRLP54845 237 aa8.22□□□□□ -1.09
PHF20-213ENST00000486408 PSMD2Q13200 908 aa8.22□□□□□ -1.09
PHF20-213ENST00000486408 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
PHF20-213ENST00000486408 ZNF468Q5VIY5 522 aaPredicted RBP8.22□□□□□ -1.09
PHF20-213ENST00000486408 PEAR1Q5VY43 1037 aaPredicted RBP8.22□□□□□ -1.09
PHF20-213ENST00000486408 PI16Q6UXB8 463 aa8.22□□□□□ -1.09
PHF20-213ENST00000486408 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms