RNA–Protein interactions for RNA: ENST00000486408.5

PHF20-213, Transcript of PHD finger protein 20, humanhuman

TSL 5

Gene PHF20, Length 809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-213ENST00000486408 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
PHF20-213ENST00000486408 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
PHF20-213ENST00000486408 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
PHF20-213ENST00000486408 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
PHF20-213ENST00000486408 FOXD1Q16676 465 aa18.65■□□□□ 0.58
PHF20-213ENST00000486408 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
PHF20-213ENST00000486408 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
PHF20-213ENST00000486408 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
PHF20-213ENST00000486408 ADRA2BP18089 450 aa17.51■□□□□ 0.39
PHF20-213ENST00000486408 MSH5O43196 834 aa17.47■□□□□ 0.39
PHF20-213ENST00000486408 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
PHF20-213ENST00000486408 KCNA4P22459 653 aa16.5■□□□□ 0.23
PHF20-213ENST00000486408 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
PHF20-213ENST00000486408 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
PHF20-213ENST00000486408 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
PHF20-213ENST00000486408 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
PHF20-213ENST00000486408 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
PHF20-213ENST00000486408 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
PHF20-213ENST00000486408 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
PHF20-213ENST00000486408 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
PHF20-213ENST00000486408 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
PHF20-213ENST00000486408 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
PHF20-213ENST00000486408 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
PHF20-213ENST00000486408 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
PHF20-213ENST00000486408 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
PHF20-213ENST00000486408 ZBTB22O15209 634 aa15.22■□□□□ 0.03
PHF20-213ENST00000486408 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
PHF20-213ENST00000486408 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
PHF20-213ENST00000486408 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
PHF20-213ENST00000486408 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
PHF20-213ENST00000486408 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
PHF20-213ENST00000486408 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
PHF20-213ENST00000486408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.064e-7■■□□□ 12.3
PHF20-213ENST00000486408 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
PHF20-213ENST00000486408 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
PHF20-213ENST00000486408 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
PHF20-213ENST00000486408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
PHF20-213ENST00000486408 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
PHF20-213ENST00000486408 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
PHF20-213ENST00000486408 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
PHF20-213ENST00000486408 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
PHF20-213ENST00000486408 APLP2Q06481 763 aa14.05□□□□□ -0.16
PHF20-213ENST00000486408 CAPN15O75808 1086 aa14.04□□□□□ -0.16
PHF20-213ENST00000486408 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
PHF20-213ENST00000486408 DSG3P32926 999 aa13.89□□□□□ -0.19
PHF20-213ENST00000486408 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
PHF20-213ENST00000486408 FKBP8Q14318 412 aa13.86□□□□□ -0.19
PHF20-213ENST00000486408 POTEHQ6S545 545 aa13.83□□□□□ -0.2
PHF20-213ENST00000486408 ABCB7O75027 752 aa13.71□□□□□ -0.21
PHF20-213ENST00000486408 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
PHF20-213ENST00000486408 POLA2Q14181 598 aa13.68□□□□□ -0.22
PHF20-213ENST00000486408 FBLN2P98095 1184 aa13.56□□□□□ -0.24
PHF20-213ENST00000486408 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
PHF20-213ENST00000486408 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
PHF20-213ENST00000486408 PROM2Q8N271 834 aa13.44□□□□□ -0.26
PHF20-213ENST00000486408 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
PHF20-213ENST00000486408 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
PHF20-213ENST00000486408 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
PHF20-213ENST00000486408 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
PHF20-213ENST00000486408 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
PHF20-213ENST00000486408 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
PHF20-213ENST00000486408 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
PHF20-213ENST00000486408 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
PHF20-213ENST00000486408 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
PHF20-213ENST00000486408 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
PHF20-213ENST00000486408 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
PHF20-213ENST00000486408 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
PHF20-213ENST00000486408 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
PHF20-213ENST00000486408 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
PHF20-213ENST00000486408 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
PHF20-213ENST00000486408 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
PHF20-213ENST00000486408 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
PHF20-213ENST00000486408 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
PHF20-213ENST00000486408 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
PHF20-213ENST00000486408 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
PHF20-213ENST00000486408 MIER1Q8N108 512 aa12.72□□□□□ -0.37
PHF20-213ENST00000486408 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
PHF20-213ENST00000486408 PKD2Q13563 968 aa12.71□□□□□ -0.37
PHF20-213ENST00000486408 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
PHF20-213ENST00000486408 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
PHF20-213ENST00000486408 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
PHF20-213ENST00000486408 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
PHF20-213ENST00000486408 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
PHF20-213ENST00000486408 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
PHF20-213ENST00000486408 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
PHF20-213ENST00000486408 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
PHF20-213ENST00000486408 HAX1O00165 279 aa12.51□□□□□ -0.41
PHF20-213ENST00000486408 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
PHF20-213ENST00000486408 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
PHF20-213ENST00000486408 EVX2Q03828 476 aa12.49□□□□□ -0.41
PHF20-213ENST00000486408 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
PHF20-213ENST00000486408 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
PHF20-213ENST00000486408 NUBP1P53384 320 aa12.45□□□□□ -0.42
PHF20-213ENST00000486408 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
PHF20-213ENST00000486408 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
PHF20-213ENST00000486408 RGL2O15211 777 aa12.39□□□□□ -0.43
PHF20-213ENST00000486408 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
PHF20-213ENST00000486408 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
PHF20-213ENST00000486408 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
PHF20-213ENST00000486408 GSE1Q14687 1217 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms